Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.8: Urease, gamma-subunit [54110] (1 superfamily)
    alpha(3)-beta(2); antiparallel hairpin
  4. Superfamily d.8.1: Urease, gamma-subunit [54111] (2 families) (S)
  5. Family d.8.1.1: Urease, gamma-subunit [54112] (2 proteins)
    automatically mapped to Pfam PF00547
  6. Protein automated matches [279671] (2 species)
    not a true protein

Species:

  1. Helicobacter pylori [TaxId:210] [397954] (2 PDB entries)
    1. Domains for 6qsu:
      1. Domain d6qsua1: 6qsu A:1-105 [400135]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      2. Domain d6qsuc1: 6qsu C:1-105 [400142]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      3. Domain d6qsue1: 6qsu E:1-105 [401387]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      4. Domain d6qsug1: 6qsu G:1-105 [400128]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      5. Domain d6qsui1: 6qsu I:1-105 [400130]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      6. Domain d6qsuk1: 6qsu K:1-105 [400137]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      7. Domain d6qsum1: 6qsu M:1-105 [400132]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      8. Domain d6qsuo1: 6qsu O:1-105 [400832]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      9. Domain d6qsuq1: 6qsu Q:1-105 [400139]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      10. Domain d6qsus1: 6qsu S:1-105 [400840]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      11. Domain d6qsuu1: 6qsu U:1-105 [400144]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
      12. Domain d6qsuw1: 6qsu W:1-105 [400779]
        Other proteins in same PDB: d6qsua2, d6qsuc2, d6qsue2, d6qsug2, d6qsui2, d6qsuk2, d6qsum2, d6qsuo2, d6qsuq2, d6qsus2, d6qsuu2, d6qsuw2
        automated match to d1e9ya2
        complexed with bme, ni
    2. Domains for 6zja:
      1. Domain d6zjaa1: 6zja A:1-105 [398082]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      2. Domain d6zjac1: 6zja C:1-105 [398002]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      3. Domain d6zjae1: 6zja E:1-105 [397955]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      4. Domain d6zjag1: 6zja G:1-105 [397960]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      5. Domain d6zjai1: 6zja I:1-105 [398080]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      6. Domain d6zjak1: 6zja K:1-105 [397965]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      7. Domain d6zjam1: 6zja M:1-105 [397958]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      8. Domain d6zjao1: 6zja O:1-105 [398084]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      9. Domain d6zjaq1: 6zja Q:1-105 [398075]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      10. Domain d6zjas1: 6zja S:1-105 [398086]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      11. Domain d6zjau1: 6zja U:1-105 [397969]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
      12. Domain d6zjaw1: 6zja W:1-105 [397967]
        Other proteins in same PDB: d6zjaa2, d6zjac2, d6zjae2, d6zjag2, d6zjai2, d6zjak2, d6zjam2, d6zjao2, d6zjaq2, d6zjas2, d6zjau2, d6zjaw2
        automated match to d1e9ya2
        complexed with djm, ni
  2. Sporosarcina pasteurii [TaxId:1474] [279673] (11 PDB entries)
    1. Domain for 5a6t:
    2. Domain for 5fsd:
    3. Domain for 5fse:
    4. Domain for 5g4h:
    5. Domain for 5ol4:
    6. Domain for 6g48:
    7. Domain for 6h8j:
    8. Domain for 6i9y:
    9. Domain for 6qdy:
    10. Domain for 6rkg:
    11. Domain for 6rp1:

More info for Protein automated matches from d.8.1.1: Urease, gamma-subunit

Timeline for Protein automated matches from d.8.1.1: Urease, gamma-subunit: