Lineage for d4yo8a1 (4yo8 A:3-231)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2464564Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2464581Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 2465548Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 2465549Protein automated matches [190781] (41 species)
    not a true protein
  7. 2465724Species Helicobacter pylori [TaxId:85963] [189517] (16 PDB entries)
  8. 2465741Domain d4yo8a1: 4yo8 A:3-231 [279655]
    Other proteins in same PDB: d4yo8a2, d4yo8b2
    automated match to d3nm6b_
    complexed with 4ez, zn

Details for d4yo8a1

PDB Entry: 4yo8 (more details), 2.1 Å

PDB Description: crystal structure of helicobacter pylori 5'-methylthioadenosine/s- adenosyl homocysteine nucleosidase (mtan) complexed with (((4-amino- 5h-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)(hexyl)amino)methanol
PDB Compounds: (A:) Aminodeoxyfutalosine nucleosidase

SCOPe Domain Sequences for d4yo8a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4yo8a1 c.56.2.0 (A:3-231) automated matches {Helicobacter pylori [TaxId: 85963]}

SCOPe Domain Coordinates for d4yo8a1:

Click to download the PDB-style file with coordinates for d4yo8a1.
(The format of our PDB-style files is described here.)

Timeline for d4yo8a1:

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