SCOPe 2.07: Domain d5a4fm_: 5a4f M:

Lineage for d5a4fm_ (5a4f M:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.0: automated matches [191637] (1 protein)
   not a true family

6. Protein automated matches [191173] (15 species)
   not a true protein

7. Species Escherichia coli [TaxId:1403831] [279526] (3 PDB entries)

8. Domain d5a4fm_: 5a4f M: [279539]
   Other proteins in same PDB: d5a4fs_, d5a4ft_
   automated match to d3uqyl_
   complexed with cl, f3s, fco, mg, ni, sf3, sf4, so4

Details for d5a4fm_

PDB Entry: 5a4f, 1.25 Å

PDB Description: the mechanism of hydrogen activation by nife-hydrogenases.

PDB Compounds: (M:) Hydrogenase-1 large chain

SCOPe Domain Sequences for d5a4fm_:

Sequence; same for both SEQRES and ATOM records:

>d5a4fm_ e.18.1.0 (M:) automated matches {Escherichia coli [TaxId: 1403831]}
stqyetqgytinnagrrlvvdpitrieghmrcevnindqnvitnavscgtmfrgleiilq
grdprdawafvericgvctgvhalasvyaiedaigikvpdnaniirnimlatlwchahlv
hfyqlagmdwidvldalkadprktselaqslsswpksspgyffdvqnrlkkfveggqlgi
frngywghpqyklppeanlmgfahylealdfqreivkihavfggknphpnwivggmpcai
nidesgavgavnmerlnlvqsiitrtadfinnvmipdalaigqfnkpwseigtglsdkcv
lsygafpdiandfgeksllmpggavingdfnnvlpvdlvdpqqvqefvdhawyrypndqv
grhpfdgitdpwynpgdvkgsdtniqqlneqeryswikaprwrgnamevgplartliayh
kgdaatvesvdrmmsalnlplsgiqstlgrilcraheaqwaagklqyffdklmtnlkngn
latastekwepatwptecrgvgfteaprgalghwaairdgkidlyqcvvpttwnasprdp
kgqigayeaalmntkmaipeqpleilrtlhsfdpclacsth

Timeline for d5a4fm_:

• d5a4fm_ first appeared in SCOPe 2.05
  
• d5a4fm_ appears in SCOPe 2.06
  
• d5a4fm_ appears in the current release, SCOPe 2.08