Lineage for d4yi3a_ (4yi3 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2142044Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
    consists of two non-similar domains with 3 layers (a/b/a) each
    domain 1: parallel beta-sheet of 7 strands, order 3214567
    domain 2: parallel beta-sheet of 6 strands, order 321456
  4. 2142045Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families) (S)
  5. 2142109Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 protein domains)
    automatically mapped to Pfam PF00343
  6. 2142250Protein automated matches [190111] (3 species)
    not a true protein
  7. 2142266Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [187274] (121 PDB entries)
  8. 2142355Domain d4yi3a_: 4yi3 A: [279516]
    automated match to d1z8da_
    complexed with 4d0, dms, imp, plp

Details for d4yi3a_

PDB Entry: 4yi3 (more details), 1.8 Å

PDB Description: crystal structure of gpb in complex with 4a
PDB Compounds: (A:) Glycogen phosphorylase, muscle form

SCOPe Domain Sequences for d4yi3a_:

Sequence, based on SEQRES records: (download)

>d4yi3a_ c.87.1.4 (A:) automated matches {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
qisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtq
qhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedagl
gngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpwek
arpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapnd
fnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrf
ksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvkt
caytnhtvlpealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslv
eegavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitprrw
lvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaayler
eykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkaap
gyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagt
easgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqey
ydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsaly
knprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpa

Sequence, based on observed residues (ATOM records): (download)

>d4yi3a_ c.87.1.4 (A:) automated matches {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
qisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtq
qhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedagl
gngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpwek
arpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapnd
gyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkssnfdafp
dkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcaytnhtvlpealerwpvh
lletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveegavkrinmahlciagsh
avngvarihseilkktifkdfyelephkfqnktngitprrwlvlcnpglaeiiaerigee
yisdldqlrkllsyvddeafirdvakvkqenklkfaaylereykvhinpnslfdvqvkri
heykrqllnclhvitlynrikkepnkfvvprtvmiggkaapgyhmakmiiklitaigdvv
nhdpvvgdrlrviflenyrvslaekvipaadlseqistagteasgtgnmkfmlngaltig
tmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydripelrqiieqlssgff
spkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknprewtrmvirniatsgk
fssdrtiaqyareiwgvepsrqrlpa

SCOPe Domain Coordinates for d4yi3a_:

Click to download the PDB-style file with coordinates for d4yi3a_.
(The format of our PDB-style files is described here.)

Timeline for d4yi3a_: