SCOPe 2.05: Domain d5bnpa_: 5bnp A:

Lineage for d5bnpa_ (5bnp A:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (10 species)
   not a true protein

7. Species Enterovirus d68 [TaxId:42789] [269068] (5 PDB entries)

8. Domain d5bnpa_: 5bnp A: [279411]
   automated match to d1h8ta_
   complexed with 4u2

Details for d5bnpa_

PDB Entry: 5bnp, 2.15 Å

PDB Description: crystal structure of human enterovirus d68 in complex with 3'sln

PDB Compounds: (A:) Capsid protein VP1

SCOPe Domain Sequences for d5bnpa_:

Sequence, based on SEQRES records:

>d5bnpa_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
vesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflgraalvskksfeyknhasssagthknffkwtintksfvqlrrklelftylrfdaeit
ilttvavngnndstymglpdltlqamfvptgaltpkeqdsfhwqsgsnasvffkisdppa
rmtipfmcinsaysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvy
mkpkhikawaprpprtmpymsiananykgrdtapntlnaiignrasvttmphniv

Sequence, based on observed residues (ATOM records):

>d5bnpa_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
vesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflgraalvskksfeyknhasssthknffkwtintksfvqlrrklelftylrfdaeitil
ttvavnymglpdltlqamfvptgaltpkeqdsfhwqsgsnasvffkisdpparmtipfmc
insaysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvymkpkhika
waprpprtmpymsiananykgrdtapntlnaiignrasvttmphniv

Timeline for d5bnpa_:

• d5bnpa_ is new in SCOPe 2.05-stable
  
• d5bnpa_ appears in SCOPe 2.06
  
• d5bnpa_ appears in the current release, SCOPe 2.08