SCOPe 2.08: Domain d5bnoa_: 5bno A:

Lineage for d5bnoa_ (5bno A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Enterovirus d68 [TaxId:42789] [269068] (15 PDB entries)

8. Domain d5bnoa_: 5bno A: [279409]
   automated match to d1h8ta_

Details for d5bnoa_

PDB Entry: 5bno, 2.15 Å

PDB Description: crystal structure of human enterovirus d68 in complex with 6'sln

PDB Compounds: (A:) Capsid protein VP1

SCOPe Domain Sequences for d5bnoa_:

Sequence, based on SEQRES records:

>d5bnoa_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
vesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflgraalvskksfeyknhasssagthknffkwtintksfvqlrrklelftylrfdaeit
ilttvavngnndstymglpdltlqamfvptgaltpkeqdsfhwqsgsnasvffkisdppa
rmtipfmcinsaysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvy
mkpkhikawaprpprtmpymsiananykgrdtapntlnaiignrasvttmphnivt

Sequence, based on observed residues (ATOM records):

>d5bnoa_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
vesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflgraalvskksfeyknhasthknffkwtintksfvqlrrklelftylrfdaeitiltt
vavnymglpdltlqamfvptgaltpkeqdsfhwqsgsnasvffkisdpparmtipfmcin
saysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvymkpkhikawa
prpprtmpymsiananykgrdtapntlnaiignrasvttmphnivt

Timeline for d5bnoa_:

• d5bnoa_ first appeared in SCOPe 2.05
  
• d5bnoa_ appears in SCOPe 2.07