SCOPe 2.08: Domain d5dw3d_: 5dw3 D:

Lineage for d5dw3d_ (5dw3 D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
   consists of two similar domains related by pseudo dyad; duplication
   core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214

4. Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families)

5. Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 proteins)

6. Protein automated matches [190054] (13 species)
   not a true protein

7. Species Pyrococcus furiosus [TaxId:186497] [279274] (16 PDB entries)

8. Domain d5dw3d_: 5dw3 D: [279277]
   automated match to d1v8zb_
   complexed with na, po4, trp

Details for d5dw3d_

PDB Entry: 5dw3, 1.74 Å

PDB Description: tryptophan synthase beta-subunit from pyrococcus furiosus with product l-tryptophan non-covalently bound in the active site

PDB Compounds: (D:) Tryptophan synthase beta chain 1

SCOPe Domain Sequences for d5dw3d_:

Sequence, based on SEQRES records:

>d5dw3d_ c.79.1.1 (D:) automated matches {Pyrococcus furiosus [TaxId: 186497]}
mwfgefggqyvpetlieplkelekaykrfkddeefnrqlnyylktwagrptplyyakrlt
ekiggakiylkredlvhggahktnnaigqallakfmgktrliaetgagqhgvatamagal
lgmkvdiymgaedverqkmnvfrmkllganvipvnsgsrtlkdainealrdwvatfeyth
yligsvvgphpyptivrdfqsvigreakaqileaegqlpdvivacvgggsnamgifypfv
ndkkvklvgveaggkglesgkhsaslnagqvgvfhgmlsyflqdeegqikpthsiapgld
ypgvgpehaylkkiqraeyvtvtdeealkafhelsrtegiipalesahavayamklakem
srdeiiivnlsgrgdkdldivlkvs

Sequence, based on observed residues (ATOM records):

>d5dw3d_ c.79.1.1 (D:) automated matches {Pyrococcus furiosus [TaxId: 186497]}
mwfgefggqyvpetlieplkelekaykrfkddeefnrqlnyylktwagrptplyyakrlt
ekiggakiylkredlvhggahktnnaigqallakfmgktrliaetgagqhgvatamagal
lgmkvdiymgaedverqkmnvfrmkllganvipvnsgsrtlkdainealrdwvatfeyth
yligsvvgphpyptivrdfqsvigreakaqileaegqlpdvivacvgggsnamgifypfv
ndkkvklvgveaggkglesgkhsaslnagqvgvfhgmlsyflqdegqikpthsiapgldy
pgvgpehaylkkiqraeyvtvtdeealkafhelsrtegiipalesahavayamklakems
rdeiiivnlsgrgdkdldivlkvs

Timeline for d5dw3d_:

• d5dw3d_ first appeared in SCOPe 2.05
  
• d5dw3d_ appears in SCOPe 2.07