SCOPe 2.05: Domain d5byrb3: 5byr B:210-573

Lineage for d5byrb3 (5byr B:210-573)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.96: Fe-only hydrogenase [53919] (1 superfamily)
   consist of two intertwined domains; contains partial duplication

4. Superfamily c.96.1: Fe-only hydrogenase [53920] (1 family)
   automatically mapped to Pfam PF02906

5. Family c.96.1.1: Fe-only hydrogenase [53921] (3 proteins)

6. Protein automated matches [279207] (1 species)
   not a true protein

7. Species Clostridium pasteurianum [TaxId:1501] [279208] (5 PDB entries)

8. Domain d5byrb3: 5byr B:210-573 [279218]
   Other proteins in same PDB: d5byra1, d5byra2, d5byrb1, d5byrb2
   automated match to d3c8ya1
   complexed with 4ww, fes, gol, mg, sf4

Details for d5byrb3

PDB Entry: 5byr, 1.82 Å

PDB Description: semisynthetic [fefe]-hydrogenase cpi with propane-dithiolato-bridged [2fe] cofactor

PDB Compounds: (B:) Iron hydrogenase 1

SCOPe Domain Sequences for d5byrb3:

Sequence; same for both SEQRES and ATOM records:

>d5byrb3 c.96.1.1 (B:210-573) automated matches {Clostridium pasteurianum [TaxId: 1501]}
hmdrvknalnapekhvivamapsvrasigelfnmgfgvdvtgkiytalrqlgfdkifdin
fgadmtimeeatelvqrienngpfpmftsccpgwvrqaenyypellnnlssakspqqifg
tasktyypsisgldpknvftvtvmpctskkfeadrpqmekdglrdidavittrelakmik
dakipfakledseadpamgeysgagaifgatggvmeaalrsakdfaenaeledieykqvr
glngikeaeveinnnkynvavingasnlfkfmksgminekqyhfievmachggcvngggq
phvnpkdlekvdikkvrasvlynqdehlskrkshentalvkmyqnyfgkpgegraheilh
fkyk

Timeline for d5byrb3:

• d5byrb3 is new in SCOPe 2.05-stable
  
• d5byrb3 appears in SCOPe 2.06
  
• d5byrb3 appears in the current release, SCOPe 2.08