Lineage for d5cq1a_ (5cq1 A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081989Protein automated matches [190099] (25 species)
    not a true protein
  7. 2082129Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [278910] (6 PDB entries)
  8. 2082138Domain d5cq1a_: 5cq1 A: [278920]
    automated match to d1x1na1
    complexed with bgc, edo, glc

Details for d5cq1a_

PDB Entry: 5cq1 (more details), 2.3 Å

PDB Description: disproportionating enzyme 1 from arabidopsis - cycloamylose soak
PDB Compounds: (A:) 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic

SCOPe Domain Sequences for d5cq1a_:

Sequence, based on SEQRES records: (download)

>d5cq1a_ c.1.8.1 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
svgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcs
vwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqta
nklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfew
peplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvg
yhsadvwankkhfllnkkgfpllvsgvppdlfsetgqlwgsplydwkamesdqyswwvnr
irraqdlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiia
edlgvitkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirg
wwdtldqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntp
atevgnwgwripsstsfdnletesdrlrdllslygrl

Sequence, based on observed residues (ATOM records): (download)

>d5cq1a_ c.1.8.1 (A:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
svgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcs
vwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqta
nklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfew
peplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvg
yhsadvwankkhfllnkkgfpllvsgvppsetgqlwgsplydwkamesdqyswwvnrirr
aqdlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedl
gvitkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwd
tldqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpate
vgnwgwripsstsfdnletesdrlrdllslygrl

SCOPe Domain Coordinates for d5cq1a_:

Click to download the PDB-style file with coordinates for d5cq1a_.
(The format of our PDB-style files is described here.)

Timeline for d5cq1a_: