Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081989Protein automated matches [190099] (25 species)
    not a true protein
  7. 2082129Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [278910] (6 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 5cpq:
    1. 2082134Domain d5cpqa_: 5cpq A: [278915]
      automated match to d1x1na1
      complexed with edo
    2. 2082135Domain d5cpqb_: 5cpq B: [278918]
      automated match to d1x1na1
      complexed with edo
  2. Domain(s) for 5cps:
    1. 2082130Domain d5cpsa_: 5cps A: [278913]
      automated match to d1x1na1
      complexed with edo, glc
    2. 2082131Domain d5cpsb_: 5cps B: [278914]
      automated match to d1x1na1
      complexed with edo, glc
  3. Domain(s) for 5cpt:
    1. 2082136Domain d5cpta_: 5cpt A: [278912]
      automated match to d1x1na1
      complexed with bgc, edo, glc
    2. 2082137Domain d5cptb_: 5cpt B: [278911]
      automated match to d1x1na1
      complexed with bgc, edo, glc
  4. Domain(s) for 5cq1:
    1. 2082138Domain d5cq1a_: 5cq1 A: [278920]
      automated match to d1x1na1
      complexed with bgc, edo, glc
    2. 2082139Domain d5cq1b_: 5cq1 B: [278919]
      automated match to d1x1na1
      complexed with bgc, edo, glc
  5. Domain(s) for 5csu:
    1. 2082140Domain d5csua_: 5csu A: [278927]
      automated match to d1x1na1
      complexed with agl, bgc, edo, glc, hmc
    2. 2082141Domain d5csub_: 5csu B: [278923]
      automated match to d1x1na1
      complexed with agl, bgc, edo, glc, hmc
  6. Domain(s) for 5csy:
    1. 2082132Domain d5csya_: 5csy A: [278922]
      automated match to d1x1na1
      complexed with acr, bgc, edo, glc
    2. 2082133Domain d5csyb_: 5csy B: [278917]
      automated match to d1x1na1
      complexed with acr, bgc, edo, glc

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.8.1 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.8.1 automated matches: