SCOPe 2.07: Domain d4rn5a1: 4rn5 A:273-427

Lineage for d4rn5a1 (4rn5 A:273-427)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families)

5. Family b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 proteins)
   automatically mapped to Pfam PF00754

6. Protein B1 domain of neuropilin-1 [82016] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [82017] (9 PDB entries)

8. Domain d4rn5a1: 4rn5 A:273-427 [278713]
   Other proteins in same PDB: d4rn5a2
   automated match to d1kexa_
   complexed with act, gol, zn

Details for d4rn5a1

PDB Entry: 4rn5, 1.73 Å

PDB Description: b1 domain of human neuropilin-1 with acetate ion in a ligand-binding site

PDB Compounds: (A:) Neuropilin-1

SCOPe Domain Sequences for d4rn5a1:

Sequence; same for both SEQRES and ATOM records:

>d4rn5a1 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]}
fkcmealgmesgeihsdqitassqystnwsaersrlnypengwtpgedsyrewiqvdlgl
lrfvtavgtqgaisketkkkyyvktykidvssngedwitikegnkpvlfqgntnptdvvv
avfpkplitrfvrikpatwetgismrfevygckit

Timeline for d4rn5a1:

• d4rn5a1 first appeared in SCOPe 2.05, called d4rn5a_
  
• d4rn5a1 appears in SCOPe 2.06
  
• d4rn5a1 appears in the current release, SCOPe 2.08