Class b: All beta proteins [48724] (177 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) |
Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins) |
Protein Polyomavirus coat proteins [49657] (2 species) |
Species Murine polyomavirus, strain small-plaque 16 [TaxId:10634] [49658] (11 PDB entries) |
Domain d5cpxb_: 5cpx B: [278575] automated match to d1vpsa_ complexed with gal, gol, nag, sia |
PDB Entry: 5cpx (more details), 1.87 Å
SCOPe Domain Sequences for d5cpxb_:
Sequence, based on SEQRES records: (download)
>d5cpxb_ b.121.6.1 (B:) Polyomavirus coat proteins {Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]} mevldlvtgpdsvteieaflnprmgqpptpeslteggqyygwsrginlatsdtedspenn tlptwsmaklqlpmlnedltcdtlqmweavsvktevvgsgslldvhgfnkptdtvntkgi stpvegsqyhvfavggepldlqglvtdartkykeegvvtiktitkkdmvnkdqvlnpisk akldkdgmypveiwhpdpaknentryfgnytggtttppvlqftntlttvlldengvgplc kgeglylscvdimgwrvtrnydvhhwrglpryfkitlrkrwvk
>d5cpxb_ b.121.6.1 (B:) Polyomavirus coat proteins {Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]} mevldlvtgpdsvteieaflnprmgqpptpeslteggqyygwsrginlatsdtedspenn tlptwsmaklqlpmlntlqmweavsvktevvgsgslldvhgfnkptdtvntkgistpveg sqyhvfavggepldlqglvtdartkykeegvvtiktitkkdmvnkdqvlnpiskakldkd gmypveiwhpdpaknentryfgnytggtttppvlqftntlttvlldengvgplckgegly lscvdimgwrvtrnydvhhwrglpryfkitlrkrwvk
Timeline for d5cpxb_:
View in 3D Domains from other chains: (mouse over for more information) d5cpxa_, d5cpxc_, d5cpxd_, d5cpxe_ |