Lineage for d5cpwd_ (5cpw D:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076457Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 2076458Family b.121.6.1: Papovaviridae-like VP [88649] (3 protein domains)
  6. 2076462Protein Polyomavirus coat proteins [49657] (2 species)
  7. 2076463Species Murine polyomavirus, strain small-plaque 16 [TaxId:10634] [49658] (11 PDB entries)
  8. 2076487Domain d5cpwd_: 5cpw D: [278569]
    automated match to d1vpsa_
    complexed with gal, gol, nga, sia

Details for d5cpwd_

PDB Entry: 5cpw (more details), 1.75 Å

PDB Description: crystal structure of murine polyomavirus pta strain vp1 in complex with the gt1a glycan
PDB Compounds: (D:) vp1

SCOPe Domain Sequences for d5cpwd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5cpwd_ b.121.6.1 (D:) Polyomavirus coat proteins {Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]}

SCOPe Domain Coordinates for d5cpwd_:

Click to download the PDB-style file with coordinates for d5cpwd_.
(The format of our PDB-style files is described here.)

Timeline for d5cpwd_: