Lineage for Species: Mnemiopsis leidyi [TaxId: 27923]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (138 species)
    not a true protein
  7. 2145891Species Mnemiopsis leidyi [TaxId:27923] [278472] (6 PDB entries)

PDB entries in Species: Mnemiopsis leidyi [TaxId: 27923]:

  1. Domain(s) for 4yki:
    1. 2145892Domain d4ykia_: 4yki A: [278474]
      automated match to d2i0cb_
      complexed with gly, mg, so4
    2. 2145893Domain d4ykib_: 4yki B: [278475]
      automated match to d2i0cb_
      complexed with gly, mg, so4
  2. Domain(s) for 4ykj:
    1. 2145896Domain d4ykja_: 4ykj A: [278479]
      automated match to d2i0cb_
      complexed with ala, gly
    2. 2145897Domain d4ykjb_: 4ykj B: [278480]
      automated match to d2i0cb_
      complexed with ala, gly
  3. Domain(s) for 4ykk:
    1. 2145894Domain d4ykka_: 4ykk A: [278478]
      automated match to d2i0cb_
      complexed with dsn, gly, mg
    2. 2145895Domain d4ykkb_: 4ykk B: [278489]
      automated match to d2i0cb_
      complexed with dsn, gly, mg
  4. Domain(s) for 4ykp:
    1. 2145898Domain d4ykpa_: 4ykp A: [278476]
      automated match to d2i0cb_
      complexed with gly, mg, ser
    2. 2145899Domain d4ykpb_: 4ykp B: [278473]
      automated match to d2i0cb_
      complexed with gly, mg, ser
  5. Domain(s) for 5cmb:
    1. 2276393Domain d5cmba_: 5cmb A: [319694]
      automated match to d4ykib_
      complexed with gly, mg, so4; mutant
    2. 2276431Domain d5cmbb_: 5cmb B: [319732]
      automated match to d4ykib_
      complexed with gly, mg, so4; mutant
  6. Domain(s) for 5cmc:
    1. 2276385Domain d5cmca_: 5cmc A: [319686]
      automated match to d4ykib_
      complexed with gly, mg, so4; mutant
    2. 2276402Domain d5cmcb_: 5cmc B: [319703]
      automated match to d4ykib_
      complexed with gly, mg, so4; mutant

More info for Species Mnemiopsis leidyi [TaxId:27923] from c.94.1.0 automated matches

Timeline for Species Mnemiopsis leidyi [TaxId:27923] from c.94.1.0 automated matches: