Lineage for d5d1bb1 (5d1b B:14-377)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2115321Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
    3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456
  4. 2115322Superfamily c.42.1: Arginase/deacetylase [52768] (3 families) (S)
  5. 2115600Family c.42.1.2: Histone deacetylase, HDAC [52773] (4 protein domains)
    automatically mapped to Pfam PF00850
  6. 2115643Protein automated matches [190786] (1 species)
    not a true protein
  7. 2115644Species Human (Homo sapiens) [TaxId:9606] [188039] (27 PDB entries)
  8. 2115694Domain d5d1bb1: 5d1b B:14-377 [278341]
    Other proteins in same PDB: d5d1bb2
    automated match to d4qa0a_
    complexed with k, tsn, zn

Details for d5d1bb1

PDB Entry: 5d1b (more details), 2.9 Å

PDB Description: crystal structure of g117e hdac8 in complex with tsa
PDB Compounds: (B:) Histone deacetylase 8

SCOPe Domain Sequences for d5d1bb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5d1bb1 c.42.1.2 (B:14-377) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5d1bb1:

Click to download the PDB-style file with coordinates for d5d1bb1.
(The format of our PDB-style files is described here.)

Timeline for d5d1bb1:

  • d5d1bb1 first appeared in SCOPe 2.05, called d5d1bb_

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