Lineage for d4yp5a1 (4yp5 A:4-172)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2105374Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 2105663Family c.26.1.3: Adenylyltransferase [52397] (6 protein domains)
  6. 2105692Protein Nicotinamide mononucleotide (NMN) adenylyltransferase [52400] (8 species)
  7. 2105766Species Methanothermobacter thermautotrophicus [TaxId:187420] [278213] (3 PDB entries)
  8. 2105770Domain d4yp5a1: 4yp5 A:4-172 [278211]
    Other proteins in same PDB: d4yp5a2, d4yp5b2, d4yp5c2
    automated match to d1m8ka_
    complexed with nap

Details for d4yp5a1

PDB Entry: 4yp5 (more details), 2.21 Å

PDB Description: crystal structure of methanobacterium thermoautotrophicum nmnat in complex with nadp
PDB Compounds: (A:) Nicotinamide-nucleotide Adenylyltransferase

SCOPe Domain Sequences for d4yp5a1:

Sequence, based on SEQRES records: (download)

>d4yp5a1 c.26.1.3 (A:4-172) Nicotinamide mononucleotide (NMN) adenylyltransferase {Methanothermobacter thermautotrophicus [TaxId: 187420]}
mrgllvgrmqpfhrghlqviksileevdeliicigsaqlshsirdpftagervmmltkal
sengipasryyiipvqdiecnalwvghikmltppfdrvysgnplvqrlfsedgyevtapp
lfyrdrysgtevrrrmlddgdwrsllpesvvevideingverikhlakk

Sequence, based on observed residues (ATOM records): (download)

>d4yp5a1 c.26.1.3 (A:4-172) Nicotinamide mononucleotide (NMN) adenylyltransferase {Methanothermobacter thermautotrophicus [TaxId: 187420]}
mrgllvgrmqpfhrghlqviksileevdeliicigsaqlshsirdpftagervmmltkal
sengipasryyiipvqdiecnalwvghikmltppfdrvysgnplvqrlfsedgyevtapp
lfyysgtevrrrmlddgdwrsllpesvvevideingverikhlakk

SCOPe Domain Coordinates for d4yp5a1:

Click to download the PDB-style file with coordinates for d4yp5a1.
(The format of our PDB-style files is described here.)

Timeline for d4yp5a1:

  • d4yp5a1 first appeared in SCOPe 2.05, called d4yp5a_