SCOPe 2.08: Domain d1amya1: 1amy A:347-403

Lineage for d1amya1 (1amy A:347-403)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
   folded sheet; greek-key

4. Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families)
   this domain is C-terminal to the catalytic beta/alpha barrel domain

5. Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (22 proteins)
   this domain follows the catalytic beta/alpha barrel domain

6. Protein Plant alpha-amylase [51040] (2 species)
   single beta-sheet; probable result of a decay of the common-fold

7. Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51041] (3 PDB entries)

8. Domain d1amya1: 1amy A:347-403 [27799]
   Other proteins in same PDB: d1amya2
   complexed with ca
   heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures

Details for d1amya1

PDB Entry: 1amy, 2.8 Å

PDB Description: crystal and molecular structure of barley alpha-amylase

PDB Compounds: (A:) 1,4-alpha-d-glucan glucanohydrolase

SCOPe Domain Sequences for d1amya1:

Sequence; same for both SEQRES and ATOM records:

>d1amya1 b.71.1.1 (A:347-403) Plant alpha-amylase {Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]}
hnesklqiieadadlylaeidgkvivklgprydvgnlipggfkvaahgndyavweki

Timeline for d1amya1:

• d1amya1 first appeared (with stable ids) in SCOP 1.55, called d1amy_1
  
• d1amya1 appears in SCOPe 2.07