Lineage for Species: Rotavirus a [TaxId: 28875]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2373039Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2373040Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2375103Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2375104Protein automated matches [190437] (63 species)
    not a true protein
  7. 2375619Species Rotavirus a [TaxId:28875] [277665] (10 PDB entries)

PDB entries in Species: Rotavirus a [TaxId: 28875]:

  1. Domain(s) for 4yfw:
    1. 2375620Domain d4yfwa_: 4yfw A: [277666]
      automated match to d3taya_
    2. 2375621Domain d4yfwb_: 4yfw B: [277668]
      automated match to d3taya_
  2. Domain(s) for 5jdb:
    1. 2375622Domain d5jdba_: 5jdb A: [319557]
      automated match to d2dwra_
    2. 2375623Domain d5jdbb_: 5jdb B: [319551]
      automated match to d2dwra_
    3. 2375624Domain d5jdbc_: 5jdb C: [319558]
      automated match to d2dwra_
    4. 2375625Domain d5jdbd_: 5jdb D: [319537]
      automated match to d2dwra_
    5. 2375626Domain d5jdbe_: 5jdb E: [319573]
      automated match to d2dwra_
    6. 2375627Domain d5jdbf_: 5jdb F: [319575]
      automated match to d2dwra_
  3. Domain(s) for 5vx4:
  4. Domain(s) for 5vx5:
  5. Domain(s) for 6h9w:
  6. Domain(s) for 6h9z:
    1. 3070023Domain d6h9zb_: 6h9z B: [370085]
      Other proteins in same PDB: d6h9za2
      automated match to d5jdba_
      complexed with dtt, so4
    2. 3070027Domain d6h9za1: 6h9z A:4-162 [370089]
      Other proteins in same PDB: d6h9za2
      automated match to d5jdba_
      complexed with dtt, so4
  7. Domain(s) for 6ha0:
    1. 3070025Domain d6ha0b1: 6ha0 B:228-386 [370087]
      Other proteins in same PDB: d6ha0a2, d6ha0b2
      automated match to d5jdba_
      complexed with fuc, gal, nag
    2. 3070043Domain d6ha0a1: 6ha0 A:228-386 [370105]
      Other proteins in same PDB: d6ha0a2, d6ha0b2
      automated match to d5jdba_
      complexed with fuc, gal, nag
  8. Domain(s) for 6k2n:
    1. 3075473Domain d6k2nd_: 6k2n D: [375535]
      automated match to d5jdba_
      complexed with a2g, gal, nag
    2. 3075479Domain d6k2nb_: 6k2n B: [375541]
      automated match to d5jdba_
      complexed with a2g, gal, nag
    3. 3075480Domain d6k2nc_: 6k2n C: [375542]
      automated match to d5jdba_
      complexed with a2g, gal, nag
    4. 3075487Domain d6k2nf_: 6k2n F: [375549]
      automated match to d5jdba_
      complexed with a2g, gal, nag
    5. 3075494Domain d6k2ne_: 6k2n E: [375556]
      automated match to d5jdba_
      complexed with a2g, gal, nag
    6. 3075518Domain d6k2na_: 6k2n A: [375580]
      automated match to d5jdba_
      complexed with a2g, gal, nag
  9. Domain(s) for 6k2o:
  10. Domain(s) for 6pcu:
    1. 3073648Domain d6pcua1: 6pcu A:64-223 [373710]
      Other proteins in same PDB: d6pcua2, d6pcub_, d6pcuc1, d6pcuc2, d6pcud2, d6pcue_, d6pcuf1, d6pcuf2, d6pcug2, d6pcuh_, d6pcui1, d6pcui2
      automated match to d2aena_
      complexed with gol, so4
    2. 3073670Domain d6pcug1: 6pcu G:64-223 [373732]
      Other proteins in same PDB: d6pcua2, d6pcub_, d6pcuc1, d6pcuc2, d6pcud2, d6pcue_, d6pcuf1, d6pcuf2, d6pcug2, d6pcuh_, d6pcui1, d6pcui2
      automated match to d2aena_
      complexed with gol, so4
    3. 3073718Domain d6pcud1: 6pcu D:64-223 [373780]
      Other proteins in same PDB: d6pcua2, d6pcub_, d6pcuc1, d6pcuc2, d6pcud2, d6pcue_, d6pcuf1, d6pcuf2, d6pcug2, d6pcuh_, d6pcui1, d6pcui2
      automated match to d2aena_
      complexed with gol, so4

More info for Species Rotavirus a [TaxId:28875] from b.29.1.0 automated matches

Timeline for Species Rotavirus a [TaxId:28875] from b.29.1.0 automated matches: