SCOPe 2.08: Domain d4yz4b2: 4yz4 B:274-740

Lineage for d4yz4b2 (4yz4 B:274-740)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
   consists of six 4-stranded beta-sheet motifs; meander

4. Superfamily b.68.1: Sialidases [50939] (3 families)

5. Family b.68.1.0: automated matches [191452] (1 protein)
   not a true family

6. Protein automated matches [190692] (20 species)
   not a true protein

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [277389] (9 PDB entries)

8. Domain d4yz4b2: 4yz4 B:274-740 [277440]
   Other proteins in same PDB: d4yz4a1, d4yz4a3, d4yz4b1, d4yz4b3
   automated match to d2slia2
   complexed with sia, so4

Details for d4yz4b2

PDB Entry: 4yz4, 2.15 Å

PDB Description: crystal structure of streptococcus pneumoniae nanc, in complex with n- acetylneuraminic acid.

PDB Compounds: (B:) Sialidase, NanC

SCOPe Domain Sequences for d4yz4b2:

Sequence, based on SEQRES records:

>d4yz4b2 b.68.1.0 (B:274-740) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
ghliytandttgsnyfripvlytfsngrvfssidaryggthdflnkiniatsysddngkt
wtkpkltlafddfapvplewprevggrdlqisggatyidsvivekknkqvlmfadvmpag
vsfreatrkdsgykqidgnyylklrkqgdtdynytirengtvyddrtnrptefsvdknfg
ikqngnyltveqysvsfennkkteyrngtkvhmnifykdalfkvvptnyiayissndhge
swsaptllppimglnrnapylgpgrgiiesstgrilipsytgkesafiysddngaswkvk
vvplpsswsaeaqfvelspgviqaymrtnngkiayltskdagttwsapeylkfvsnpsyg
tqlsiinysqlidgkkavilstpnstngrkhgqiwiglinddntidwryhhdvdysnygy
systltelpnheiglmfekfdswsrnelhmknvvpyitfkiedlkkn

Sequence, based on observed residues (ATOM records):

>d4yz4b2 b.68.1.0 (B:274-740) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
ghliytandttgsnyfripvlytfsngrvfssidaryggthdflnkiniatsysddngkt
wtkpkltlafddfapvplewprevggrdlqisggatyidsvivekknkqvlmfadvmpag
vsfreatrkdsgykqidgnyylklrkqgdtdynytirengtvyddrtnrptefsvdknfg
ikqngnyltveqysvsfekkteyrngtkvhmnifykdalfkvvptnyiayissndhgesw
saptllppimglnrnapylgpgrgiiesstgrilipsytgkesafiysddngaswkvkvv
plpsswsaeaqfvelspgviqaymrtnngkiayltskdagttwsapeylkfvsnpsygtq
lsiinysqlidgkkavilstpnstngrkhgqiwiglinddntidwryhhdvdysnygysy
stltelpnheiglmfekfdswsrnelhmknvvpyitfkiedlkkn

Timeline for d4yz4b2:

• d4yz4b2 first appeared in SCOPe 2.05
  
• d4yz4b2 appears in SCOPe 2.07