SCOPe 2.07: Domain d4ywda2: 4ywd A:260-622

Lineage for d4ywda2 (4ywd A:260-622)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
   contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side

4. Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families)

5. Family c.91.1.1: PEP carboxykinase C-terminal domain [53796] (3 proteins)

6. Protein Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) [69612] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [225316] (42 PDB entries)

8. Domain d4ywda2: 4ywd A:260-622 [277400]
   Other proteins in same PDB: d4ywda1
   automated match to d3dtba2
   complexed with mn, na, ntm

Details for d4ywda2

PDB Entry: 4ywd, 2.1 Å

PDB Description: structure of rat cytosolic pepck in complex with 2,3-pyridine dicarboxylic acid

PDB Compounds: (A:) Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

SCOPe Domain Sequences for d4ywda2:

Sequence, based on SEQRES records:

>d4ywda2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpqdeepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpa
gvplvyealswqhgvfvgaamrseataaaehkgkvimhdpfamrpffgynfgkylahwls
mahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvp
kedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqri
sqm

Sequence, based on observed residues (ATOM records):

>d4ywda2 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Norway rat (Rattus norvegicus) [TaxId: 10116]}
wlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvgddiawmkfda
qgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvywegideplap
gvtitswknkewrpepcahpnsrfctpasqcpiidpawespegvpiegiifggrrpagvp
lvyealswqhgvfvgaamrseatgkvimhdpfamrpffgynfgkylahwlsmahrpaakl
pkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpigyvpkedalnlkg
lgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqrisqm

Timeline for d4ywda2:

• d4ywda2 first appeared in SCOPe 2.05
  
• d4ywda2 appears in SCOPe 2.06
  
• d4ywda2 appears in the current release, SCOPe 2.08