SCOPe 2.08: Domain d5c8ra1: 5c8r A:64-346

Lineage for d5c8ra1 (5c8r A:64-346)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
   automatically mapped to Pfam PF03414

6. Protein automated matches [190178] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186910] (75 PDB entries)

8. Domain d5c8ra1: 5c8r A:64-346 [277101]
   Other proteins in same PDB: d5c8ra2
   automated match to d3v0qa_
   complexed with da8, mn, peg, upg

Details for d5c8ra1

PDB Entry: 5c8r, 1.45 Å

PDB Description: crystal structure of abba + udp-glc + di

PDB Compounds: (A:) Histo-blood group ABO system transferase

SCOPe Domain Sequences for d5c8ra1:

Sequence, based on SEQRES records:

>d5c8ra1 c.68.1.9 (A:64-346) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssrea
ftyerrpqsqayipkdegdfyymggffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpk

Sequence, based on observed residues (ATOM records):

>d5c8ra1 c.68.1.9 (A:64-346) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevrmrrmemi
sdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftyerrpqs
qayipkdegdfyymggffggsvqevqrltrachqammvdqangieavwhdeshlnkyllr
hkptkvlspeylwdqqllgwpavlrklrftavpk

Timeline for d5c8ra1:

• d5c8ra1 first appeared in SCOPe 2.05, called d5c8ra_
  
• d5c8ra1 appears in SCOPe 2.07