SCOPe 2.08: Domain d5c1la1: 5c1l A:64-346

Lineage for d5c1la1 (5c1l A:64-346)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
   automatically mapped to Pfam PF03414

6. Protein automated matches [190178] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186910] (75 PDB entries)

8. Domain d5c1la1: 5c1l A:64-346 [277084]
   Other proteins in same PDB: d5c1la2
   automated match to d3v0qa_
   complexed with da8, gdu, mn

Details for d5c1la1

PDB Entry: 5c1l, 1.4 Å

PDB Description: crystal structure of gtb + udp-gal + di

PDB Compounds: (A:) Histo-blood group ABO system transferase

SCOPe Domain Sequences for d5c1la1:

Sequence, based on SEQRES records:

>d5c1la1 c.68.1.9 (A:64-346) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgaykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssrea
ftyerrpqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpk

Sequence, based on observed residues (ATOM records):

>d5c1la1 c.68.1.9 (A:64-346) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevgavsmrrm
emisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpsfygssreaftyerr
pqsqayipkdegdfyymgaffggsvqevqrltrachqammvdqangieavwhdeshlnky
llrhkptkvlspeylwdqqllgwpavlrklrftavpk

Timeline for d5c1la1:

• d5c1la1 first appeared in SCOPe 2.05, called d5c1la_
  
• d5c1la1 appears in SCOPe 2.07