SCOPe 2.08: Domain d4rl4a1: 4rl4 A:1-173

Lineage for d4rl4a1 (4rl4 A:1-173)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.144: RibA-like [142694] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 1235467, strands 1 and 3 are antiparallel to the rest; partial topological similarity to some alpha/beta hydrolases (53473)

4. Superfamily c.144.1: RibA-like [142695] (2 families)
   automatically mapped to Pfam PF00925

5. Family c.144.1.0: automated matches [276350] (1 protein)
   not a true family

6. Protein automated matches [276351] (1 species)
   not a true protein

7. Species Helicobacter pylori [TaxId:85962] [276352] (1 PDB entry)

8. Domain d4rl4a1: 4rl4 A:1-173 [276353]
   Other proteins in same PDB: d4rl4a2, d4rl4b2
   automated match to d2bz1a_
   complexed with ppv

Details for d4rl4a1

PDB Entry: 4rl4, 2.2 Å

PDB Description: crystal structure of gtp cyclohydrolase ii from helicobacter pylori 26695

PDB Compounds: (A:) GTP cyclohydrolase-2

SCOPe Domain Sequences for d4rl4a1:

Sequence, based on SEQRES records:

>d4rl4a1 c.144.1.0 (A:1-173) automated matches {Helicobacter pylori [TaxId: 85962]}
mkrlevsnqaklptqfgefyiqcfrekgsngskdhlvvftpnfsqnplvrlhsecltgda
lgsqkcdcggalqmaleriskegglviylrqegrgiglfnkvnayalqdkgydtiqanem
igfkdderdysvageileyyrikkmrlltnnpkkiaalekyaevtreslivca

Sequence, based on observed residues (ATOM records):

>d4rl4a1 c.144.1.0 (A:1-173) automated matches {Helicobacter pylori [TaxId: 85962]}
mkrlevsnqaklptqfgefyiqcfrekgskdhlvvftpnfsqnplvrlhsecltgdalgs
qkcdcggalqmaleriskegglviylrqegrgiglfnkvnayalqdkgydtiqanemigf
kdderdysvageileyyrikkmrlltnnpkkiaalekyaevtreslivca

Timeline for d4rl4a1:

• d4rl4a1 first appeared in SCOPe 2.05, called d4rl4a_
  
• d4rl4a1 appears in SCOPe 2.07