Class b: All beta proteins [48724] (176 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) |
Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins) the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2 there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus) |
Protein automated matches [190854] (11 species) not a true protein |
Species Coxsackievirus a16 [TaxId:31704] [276274] (3 PDB entries) |
Domain d5abjc_: 5abj C: [276645] Other proteins in same PDB: d5abja_, d5abjb_ automated match to d5c4wc_ complexed with cl, na, ym2 |
Domain d5c4wc_: 5c4w C: [276275] Other proteins in same PDB: d5c4wa_, d5c4wb_ automated match to d3vbhc_ complexed with cl, k, na, sph |
Domain d5c9ac_: 5c9a C: [276278] Other proteins in same PDB: d5c9aa_ automated match to d3vbhc_ complexed with cl, k, sph |
Timeline for Species Coxsackievirus a16 [TaxId:31704] from b.121.4.1 automated matches: