Lineage for d5c4wa_ (5c4w A:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1812227Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 1812436Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 1813002Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 1813003Protein automated matches [190988] (10 species)
    not a true protein
  7. 1813006Species Coxsackievirus a16 [TaxId:31704] [276271] (3 PDB entries)
  8. 1813007Domain d5c4wa_: 5c4w A: [276273]
    Other proteins in same PDB: d5c4wc_
    automated match to d4ceya_
    complexed with cl, k, na, sph

Details for d5c4wa_

PDB Entry: 5c4w (more details), 2.65 Å

PDB Description: crystal structure of coxsackievirus a16
PDB Compounds: (A:) vp1

SCOPe Domain Sequences for d5c4wa_:

Sequence, based on SEQRES records: (download)

>d5c4wa_ b.121.4.0 (A:) automated matches {Coxsackievirus a16 [TaxId: 31704]}
dpiadmidqtvnnqvnrsltalqvlptaanteasshrlgtgvvpalqaaetgassnasdk
nlietrcvlnhhstqetaignffsraglvsiitmpttgtqntdgyvnwdidlmgyaqlrr
kcelftymrfdaeftfvvakpngelvpqllqymyvppgapkptsrdsfawqtatnpsvfv
kmtdppaqvsvpfmspasayqwfydgyptfgehlqandldygqcpnnmmgtfsirtvgie
ksphsitlrvymrikhvrawiprplrnqpylfktnpnykgndikctstsrdkittl

Sequence, based on observed residues (ATOM records): (download)

>d5c4wa_ b.121.4.0 (A:) automated matches {Coxsackievirus a16 [TaxId: 31704]}
dpiadmirsltalqvlptaanteasshrlgtgvvpalqaaetgassnasdknlietrcvl
nhhstqetaignffsraglvsiitmpttgtqntdgyvnwdidlmgyaqlrrkcelftymr
fdaeftfvvakpngelvpqllqymyvppgapkptsrdsfawqtatnpsvfvkmtdppaqv
svpfmspasayqwfydgyptfgehlqandldygqcpnnmmgtfsirtvgieksphsitlr
vymrikhvrawiprplrnqpylfktnpnykgndikctstsrdkittl

SCOPe Domain Coordinates for d5c4wa_:

Click to download the PDB-style file with coordinates for d5c4wa_.
(The format of our PDB-style files is described here.)

Timeline for d5c4wa_: