Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2250849Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2256154Fold f.43: Chlorophyll a-b binding protein [103510] (1 superfamily)
    membrane all-alpha fold; three transmembrane helices
  4. 2256155Superfamily f.43.1: Chlorophyll a-b binding protein [103511] (2 families) (S)
    duplication: contains two structural repeats
  5. 2256178Family f.43.1.0: automated matches [276197] (1 protein)
    not a true family
  6. 2256179Protein automated matches [276200] (2 species)
    not a true protein

Species:

  1. 2256180Pea (Pisum sativum) [TaxId:3888] [276203] (4 PDB entries)
    1. Domains for 4rku:
      1. 2256195Domain d4rku3_: 4rku 3: [309461]
        Other proteins in same PDB: d4rkua_, d4rkub_, d4rkuc_, d4rkud_, d4rkue_, d4rkuf_, d4rkuj_
        automated match to d4y282_
        complexed with bcr, cl0, cla, dgd, g3p, lhg, lmg, lut, nex, pqn, sf4
      2. 2256196Domain d4rku4_: 4rku 4: [309462]
        Other proteins in same PDB: d4rkua_, d4rkub_, d4rkuc_, d4rkud_, d4rkue_, d4rkuf_, d4rkuj_
        automated match to d4y282_
        complexed with bcr, cl0, cla, dgd, g3p, lhg, lmg, lut, nex, pqn, sf4
    2. Domains for 4xk8:
      1. 2256185Domain d4xk82_: 4xk8 2: [310026]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2256186Domain d4xk83_: 4xk8 3: [310027]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      3. 2256187Domain d4xk84_: 4xk8 4: [310028]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      4. 2256188Domain d4xk87_: 4xk8 7: [310030]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      5. 2256189Domain d4xk88_: 4xk8 8: [310031]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      6. 2256190Domain d4xk89_: 4xk8 9: [310032]
        Other proteins in same PDB: d4xk8a_, d4xk8b_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y282_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
    3. Domains for 4y28:
      1. 2256191Domain d4y281_: 4y28 1: [301412]
        Other proteins in same PDB: d4y28a_, d4y28b_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d4y282_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
      2. 2256192Domain d4y282_: 4y28 2: [276207]
        Other proteins in same PDB: d4y28a_, d4y28b_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d4lcza_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
      3. 2256193Domain d4y283_: 4y28 3: [301413]
        Other proteins in same PDB: d4y28a_, d4y28b_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d4y282_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
      4. 2256194Domain d4y284_: 4y28 4: [301414]
        Other proteins in same PDB: d4y28a_, d4y28b_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d4y282_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
    4. Domains for 5l8r:
      1. 2256181Domain d5l8r1_: 5l8r 1: [341377]
        Other proteins in same PDB: d5l8ra_, d5l8rb_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4y281_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
      2. 2256182Domain d5l8r2_: 5l8r 2: [341208]
        Other proteins in same PDB: d5l8ra_, d5l8rb_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4y282_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
      3. 2256183Domain d5l8r3_: 5l8r 3: [341359]
        Other proteins in same PDB: d5l8ra_, d5l8rb_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4xk82_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
      4. 2256184Domain d5l8r4_: 5l8r 4: [341442]
        Other proteins in same PDB: d5l8ra_, d5l8rb_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4y284_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
  2. 2256197Thale cress (Arabidopsis thaliana) [TaxId:3702] [311476] (1 PDB entry)

More info for Protein automated matches from f.43.1.0: automated matches

Timeline for Protein automated matches from f.43.1.0: automated matches: