Lineage for d4xlda1 (4xld A:203-477)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2008960Protein Peroxisome proliferator activated receptor gamma, PPAR-gamma [48524] (1 species)
  7. 2008961Species Human (Homo sapiens) [TaxId:9606] [48525] (111 PDB entries)
    Uniprot P37231 232-505
  8. 2009124Domain d4xlda1: 4xld A:203-477 [276045]
    Other proteins in same PDB: d4xlda2
    automated match to d3tkma_
    complexed with brl, fmt

Details for d4xlda1

PDB Entry: 4xld (more details), 2.45 Å

PDB Description: crystal structure of the human pparg-lbd/rosiglitazone complex obtained by dry co-crystallization and in situ diffraction
PDB Compounds: (A:) Peroxisome proliferator-activated receptor gamma

SCOPe Domain Sequences for d4xlda1:

Sequence, based on SEQRES records: (download)

>d4xlda1 a.123.1.1 (A:203-477) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
qlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedki
kfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygv
heiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleldds
dlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdl
rqivtehvqllqvikktetdmslhpllqeiykdly

Sequence, based on observed residues (ATOM records): (download)

>d4xlda1 a.123.1.1 (A:203-477) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
qlnpesadlralakhlydsyiksfpltkakarailtgktspfviydmnslmmgedkikfk
evairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmn
kdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsg
drpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqv
ikktetdmslhpllqeiykdly

SCOPe Domain Coordinates for d4xlda1:

Click to download the PDB-style file with coordinates for d4xlda1.
(The format of our PDB-style files is described here.)

Timeline for d4xlda1:

  • d4xlda1 first appeared in SCOPe 2.05, called d4xlda_

View in 3D
Domains from same chain:
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d4xlda2