Lineage for d5ccjb_ (5ccj B:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2772794Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2772795Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (4 families) (S)
    two constituent families are related by circular permutation
  5. 2772956Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 proteins)
    topologically similar to the C-terminal domain of PapD
  6. 2772982Protein Synaptogamin I [49576] (3 species)
    duplication: contains tandem repeat of two similar domains
  7. 2773010Species Norway rat (Rattus norvegicus) [TaxId:10116] [49577] (12 PDB entries)
    Uniprot P21707 271-419 ! Uniprot P21707 271-419
  8. 2773018Domain d5ccjb_: 5ccj B: [275847]
    Other proteins in same PDB: d5ccjd2
    automated match to d2lhaa_
    complexed with gol, so4; mutant

Details for d5ccjb_

PDB Entry: 5ccj (more details), 1.65 Å

PDB Description: crystal structure of the quintuple mutant of the synaptotagmin-1 c2b domain
PDB Compounds: (B:) Synaptotagmin-1

SCOPe Domain Sequences for d5ccjb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ccjb_ b.7.1.2 (B:) Synaptogamin I {Norway rat (Rattus norvegicus) [TaxId: 10116]}
eklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktti
kkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrhw
sdmlanpaapiaqwhtlqveeevdamlavkk

SCOPe Domain Coordinates for d5ccjb_:

Click to download the PDB-style file with coordinates for d5ccjb_.
(The format of our PDB-style files is described here.)

Timeline for d5ccjb_: