SCOPe 2.06: Domain d5a0zd_: 5a0z D:

Lineage for d5a0zd_ (5a0z D:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.7: PFL-like glycyl radical enzymes [51997] (1 superfamily)
   contains: barrel, closed; n=10, S=10; accommodates a hairpin loop inside the barrel

4. Superfamily c.7.1: PFL-like glycyl radical enzymes [51998] (6 families)
   duplication: the N- and C-terminal halves have similar topologies

5. Family c.7.1.0: automated matches [275322] (1 protein)
   not a true family

6. Protein automated matches [275324] (2 species)
   not a true protein

7. Species Klebsiella pneumoniae [TaxId:573] [275326] (2 PDB entries)

8. Domain d5a0zd_: 5a0z D: [275328]
   automated match to d1r9da_

Details for d5a0zd_

PDB Entry: 5a0z, 3 Å

PDB Description: structure of cutc choline lyase choline free form from klebsiella pneumoniae

PDB Compounds: (D:) choline trimethylamine lyase

SCOPe Domain Sequences for d5a0zd_:

Sequence, based on SEQRES records:

>d5a0zd_ c.7.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 573]}
megltprmqrlrnhyltvrpsvsiyralaftevvkanpgmptillrakafrhacetapil
iqddelivghpcgkpragafspdiawrwvrdeldtmstrpqdpfeiseadkktireeivp
fwegrsldeiceaqyreagvwafsgetfvsdlsyhqingggdtcpgydvllftkgmngik
adaeahlaslsmenpedidriyyykaaietcegvvnyarriaaharelaakeqnaqrrae
lltiaevnenvpanppktlqealqsiwtveslfeieenqtglslgrvdqycypmfeadir
egrlthdtalellqafiikcaelmwmsselgakyfagyqpfinltvggqkrsggdacndl
tylimdavrfvkvyqpslacrihnqspqkymekivdvvkagmgfpachfddshikmmlrk
gfdfedardyclmgcvepqksgriyqwtstgytqwpiaiefvlnrgrmvlfdsyqgldtg
dlrdlrtfdefdaavkqqiahivrlsaigtvisqrvhrdvapkplmsllvegcmesgkdv
aaggamvnhgpglifsglatyvdsmaairklvfeekkytleqirdallanfegyealrrd
clnapkygnddnyvdqyalditewtekecrkykmlystlshgtlsisnntpigeltnatp
ngrlawmplsdgisptqgadkqgptaiiksvskmnvetmnigmvhnfkflkglldtpegr
hglitllrtasilgngqmqfsyvdnevlkkaqqepekyrdlivrvagysayfvelckevq
deiisrtviekf

Sequence, based on observed residues (ATOM records):

>d5a0zd_ c.7.1.0 (D:) automated matches {Klebsiella pneumoniae [TaxId: 573]}
megltprmqrlrnhyltvrpsvsiyralaftevvkanpgmptillrakafrhacetapil
iqddelivghpcgkpragafspdiawrwvrdeldtmstrpqdpfeiseadkktireeivp
fwegrsldeiceaqyreagvwafsgetfvsdlsyhqingggdtcpgydvllftkgmngik
adaeahlaslsmenpedidriyyykaaietcegvvnyarriaaharelaakeqnaqrrae
lltiaevnenvpanppktlqealqsiwtveslfeieenqtglslgrvdqycypmfeadir
egrlthdtalellqafiikcaelmwmsselgakyfagyqpfinltvggqkrsggdacndl
tylimdavrfvkvyqpslacrihnqspqkymekivdvvkagmgfpachfddshikmmlrk
gfdfedardyclmgcvepqksgriyqwtstgytqwpiaiefvlnrgrmvlfdsyqgldtg
dlrdlrtfdefdaavkqqiahivrlsaigtvisqrvhrdvapkplmsllvegcmesgkdv
aaggamvnhgpglifsglatyvdsmdnyvdqyalditewtekecrkykmlystlshgtls
itpigeltnatpqgptaiiksvsnfkflkglldtpegrhglitllrtasilgngqmqfsy
vdnevlkkaqqepekyrdlivrvagysayfvelckevqdeiisrtviekf

Timeline for d5a0zd_:

• d5a0zd_ first appeared in SCOPe 2.05
  
• d5a0zd_ appears in SCOPe 2.07
  
• d5a0zd_ appears in the current release, SCOPe 2.08