SCOPe 2.08: Domain d5bo4i1: 5bo4 I:17-112

Lineage for d5bo4i1 (5bo4 I:17-112)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.42: POZ domain [54694] (1 superfamily)
   core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143

4. Superfamily d.42.1: POZ domain [54695] (3 families)

5. Family d.42.1.1: BTB/POZ domain [54696] (6 proteins)

6. Protein Elongin C [54699] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54700] (56 PDB entries)

8. Domain d5bo4i1: 5bo4 I:17-112 [274694]
   Other proteins in same PDB: d5bo4a1, d5bo4a2, d5bo4a3, d5bo4b_, d5bo4c2, d5bo4d1, d5bo4d2, d5bo4d3, d5bo4e_, d5bo4g1, d5bo4g2, d5bo4g3, d5bo4h_, d5bo4i2, d5bo4j1, d5bo4j2, d5bo4j3, d5bo4k_, d5bo4l2, d5bo4m1, d5bo4m2, d5bo4p1, d5bo4p2, d5bo4q_
   automated match to d4b9kb_

Details for d5bo4i1

PDB Entry: 5bo4, 2.9 Å

PDB Description: structure of socs2:elongin c:elongin b from dmso-treated crystals

PDB Compounds: (I:) Transcription elongation factor B polypeptide 1

SCOPe Domain Sequences for d5bo4i1:

Sequence, based on SEQRES records:

>d5bo4i1 d.42.1.1 (I:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsgpgqfaenetnevnfreipshvlskvcmy
ftykvrytnssteipefpiapeialellmaanfldc

Sequence, based on observed residues (ATOM records):

>d5bo4i1 d.42.1.1 (I:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
myvklissdghefivkrehaltsgtikamlsgnevnfreipshvlskvcmyftykvrytn
ssteipefpiapeialellmaanfldc

Timeline for d5bo4i1:

• d5bo4i1 first appeared in SCOPe 2.05, called d5bo4i_
  
• d5bo4i1 appears in SCOPe 2.07