Lineage for d4pmda1 (4pmd A:10-337)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083716Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2083717Protein automated matches [190075] (86 species)
    not a true protein
  7. 2083782Species Caldicellulosiruptor bescii [TaxId:521460] [256973] (3 PDB entries)
  8. 2083783Domain d4pmda1: 4pmd A:10-337 [274230]
    Other proteins in same PDB: d4pmda2
    automated match to d4l4oa_
    complexed with bxp; mutant

Details for d4pmda1

PDB Entry: 4pmd (more details), 1.7 Å

PDB Description: crystal structure of cbxyn10b from caldicellulosiruptor bescii and its mutant(e139a) in complex with hydrolyzed xylotetraose
PDB Compounds: (A:) endo-1,4-beta-xylanase

SCOPe Domain Sequences for d4pmda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4pmda1 c.1.8.0 (A:10-337) automated matches {Caldicellulosiruptor bescii [TaxId: 521460]}

SCOPe Domain Coordinates for d4pmda1:

Click to download the PDB-style file with coordinates for d4pmda1.
(The format of our PDB-style files is described here.)

Timeline for d4pmda1:

  • d4pmda1 first appeared in SCOPe 2.05, called d4pmda_

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