Lineage for d4ycwf2 (4ycw F:222-575)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1920668Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 1920669Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families) (S)
  5. 1921049Family d.104.1.0: automated matches [227172] (1 protein)
    not a true family
  6. 1921050Protein automated matches [226887] (9 species)
    not a true protein
  7. 1921070Species Human (Homo sapiens) [TaxId:9606] [225403] (8 PDB entries)
  8. 1921100Domain d4ycwf2: 4ycw F:222-575 [273821]
    Other proteins in same PDB: d4ycwa1, d4ycwb1, d4ycwe1, d4ycwf1
    automated match to d3bjua2
    protein/RNA complex; complexed with krs, lys; mutant

Details for d4ycwf2

PDB Entry: 4ycw (more details), 2.9 Å

PDB Description: crystal structure of cladosporin in complex with plasmodium like human lysyl-trna synthetase mutant
PDB Compounds: (F:) Lysine--tRNA ligase

SCOPe Domain Sequences for d4ycwf2:

Sequence, based on SEQRES records: (download)

>d4ycwf2 d.104.1.0 (F:222-575) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dketryrqryldlilndfvrqkfiirskiityirsfldelgfleietpmmniipggavak
pfityhneldmnlymriatelyhkmlvvggidrvyeigrvfrnegidlthnpeftscefy
mayadyhdlmeitekmvsgmvkhitgsykvtyhpdgpegqaydvdftppfrrinmveele
kalgmklpetnlfeteetrkilddicvakavecppprttarlldklvgeflevtcinptf
icdhpqimsplakwhrskeglterfelfvmkkeicnaytelndpmrqrqlfeeqakakaa
gddeamfidenfctaleyglpptagwgmgidrvamfltdsnnikevllfpamkp

Sequence, based on observed residues (ATOM records): (download)

>d4ycwf2 d.104.1.0 (F:222-575) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dketryrqryldlilndfvrqkfiirskiityirsfldelgfleietpmmniipggavak
pfityhneldmnlymriatelyhkmlvvggidrvyeigrvfrnegidlthnpeftscefy
mayadyhdlmeitekmvsgmvkhitgsykvtyhpdgpegqaydvdftppfrrinmveele
kalgmklpetnlfeteetrkilddicvakaecppprttarlldklvgeflevtcinptfi
cdhpqimsplakwhrskeglterfelfvmkkeicnaytelndpmrqrqlfeeqakakaag
ddeamfidenfctaleyglpptagwgmgidrvamfltdsnnikevllfpamkp

SCOPe Domain Coordinates for d4ycwf2:

Click to download the PDB-style file with coordinates for d4ycwf2.
(The format of our PDB-style files is described here.)

Timeline for d4ycwf2: