Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2927847Fold d.4: His-Me finger endonucleases [54059] (1 superfamily)
    core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures
  4. 2927848Superfamily d.4.1: His-Me finger endonucleases [54060] (8 families) (S)
    common motif contains conserved histidine residue and metal-binding site
  5. 2928000Family d.4.1.0: automated matches [273673] (1 protein)
    not a true family
  6. 2928001Protein automated matches [273674] (2 species)
    not a true protein

Species:

  1. 2928002Pseudomonas aeruginosa [TaxId:287] [392841] (1 PDB entry)
  2. 2928004Pseudomonas aeruginosa, PA01 [TaxId:208964] [273675] (3 PDB entries)
    1. Domains for 4qko:
      1. 2928007Domain d4qkob_: 4qko B: [273676]
        Other proteins in same PDB: d4qkoa_, d4qkoc_, d4qkoe_, d4qkog_
        automated match to d3u43b_
        complexed with br, mg
      2. 2928008Domain d4qkod_: 4qko D: [273677]
        Other proteins in same PDB: d4qkoa_, d4qkoc_, d4qkoe_, d4qkog_
        automated match to d3u43b_
        complexed with br, mg
      3. 2928009Domain d4qkof_: 4qko F: [273680]
        Other proteins in same PDB: d4qkoa_, d4qkoc_, d4qkoe_, d4qkog_
        automated match to d3u43b_
        complexed with br, mg
      4. 2928010Domain d4qkoh_: 4qko H: [273682]
        Other proteins in same PDB: d4qkoa_, d4qkoc_, d4qkoe_, d4qkog_
        automated match to d3u43b_
        complexed with br, mg
    2. Domains for 4uhp:
      1. 2928011Domain d4uhpa_: 4uhp A: [275679]
        Other proteins in same PDB: d4uhpb_, d4uhpd_, d4uhpf1, d4uhpf2, d4uhph1, d4uhph2
        automated match to d1fr2b_
        protein/DNA complex
      2. 2928012Domain d4uhpc_: 4uhp C: [275680]
        Other proteins in same PDB: d4uhpb_, d4uhpd_, d4uhpf1, d4uhpf2, d4uhph1, d4uhph2
        automated match to d1fr2b_
        protein/DNA complex
      3. 2928013Domain d4uhpe_: 4uhp E: [275683]
        Other proteins in same PDB: d4uhpb_, d4uhpd_, d4uhpf1, d4uhpf2, d4uhph1, d4uhph2
        automated match to d1fr2b_
        protein/DNA complex
      4. 2928014Domain d4uhpg_: 4uhp G: [275685]
        Other proteins in same PDB: d4uhpb_, d4uhpd_, d4uhpf1, d4uhpf2, d4uhph1, d4uhph2
        automated match to d1fr2b_
        protein/DNA complex
    3. Domains for 4uhq:
      1. 2928005Domain d4uhqa_: 4uhq A: [275686]
        automated match to d1fr2b_
        complexed with cit, ni
      2. 2928006Domain d4uhqb_: 4uhq B: [275687]
        automated match to d1fr2b_
        complexed with cit, ni

More info for Protein automated matches from d.4.1.0: automated matches

Timeline for Protein automated matches from d.4.1.0: automated matches: