SCOPe 2.06: Domain d4qkqg1: 4qkq G:61-322

Lineage for d4qkqg1 (4qkq G:61-322)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (21 proteins)
   core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

6. Protein DNA repair protein Rad51, catalytic domain [82412] (7 species)

7. Species Methanococcus voltae [TaxId:2188] [110555] (14 PDB entries)
   Uniprot O73948

8. Domain d4qkqg1: 4qkq G:61-322 [273664]
   Other proteins in same PDB: d4qkqa2, d4qkqb2, d4qkqc2, d4qkqd2, d4qkqe2, d4qkqf2, d4qkqg2, d4qkqh2, d4qkqi2, d4qkqj2, d4qkqk2, d4qkql2
   automated match to d4dc9a_
   protein/DNA complex; complexed with 35n, no3

Details for d4qkqg1

PDB Entry: 4qkq, 2 Å

PDB Description: rada from methanococcus voltae in complex with copper phthalocyanine tetrasulfonate inhibitor

PDB Compounds: (G:) DNA repair and recombination protein radA

SCOPe Domain Sequences for d4qkqg1:

Sequence, based on SEQRES records:

>d4qkqg1 c.37.1.11 (G:61-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
dlgfksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscv
nlqnpeflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfva
raynsdmqmlfaekiedliqegnniklvvidsltstfrneytgrgklaerqqklgrhmat
lnkladlfncvvlvtnqvsakpdaffgmaeqaigghivghaatfrffvrkgkgdkrvakl
ydsphlpdaeaifritekgiqd

Sequence, based on observed residues (ATOM records):

>d4qkqg1 c.37.1.11 (G:61-322) DNA repair protein Rad51, catalytic domain {Methanococcus voltae [TaxId: 2188]}
dlgfksgidllkqrstvwklstssseldsvlggglesqsvtefagvfgsgktqimhqscv
nlqnpeflfydeeavskgevaqpkavyidtegtfrperimqmaehagidgqtvldntfva
raynsdmqmlfaekiedliqegnniklvvidsltstfrneytgrgklaerqqklgrhmat
lnkladlfncvvlvtnqvsaaeqaigghivghaatfrffvrkgkgdkrvaklydsphlpd
aeaifritekgiqd

Timeline for d4qkqg1:

• d4qkqg1 first appeared in SCOPe 2.05, called d4qkqg_
  
• d4qkqg1 appears in SCOPe 2.07
  
• d4qkqg1 appears in the current release, SCOPe 2.08