SCOPe 2.06: Domain d4yaqb1: 4yaq B:2-107

Lineage for d4yaqb1 (4yaq B:2-107)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (28 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187920] (935 PDB entries)

8. Domain d4yaqb1: 4yaq B:2-107 [273531]
   Other proteins in same PDB: d4yaqb2, d4yaql2
   automated match to d1aqkl1
   complexed with fuc, mes, nag, po4; mutant

Details for d4yaqb1

PDB Entry: 4yaq, 2.3 Å

PDB Description: crystal structure of a computationally optimized pg9 mutant

PDB Compounds: (B:) PG9_N100FY Light Chain

SCOPe Domain Sequences for d4yaqb1:

Sequence; same for both SEQRES and ATOM records:

>d4yaqb1 b.1.1.0 (B:2-107) automated matches {Human (Homo sapiens) [TaxId: 9606]}
saltqpasvsgspgqsitiscngtsndvggyesvswyqqhpgkapkvviydvskrpsgvs
nrfsgsksgntasltisglqaedegdyycksltstrrrvfgtgtkltvlg

Timeline for d4yaqb1:

• d4yaqb1 first appeared in SCOPe 2.05
  
• d4yaqb1 appears in SCOPe 2.07
  
• d4yaqb1 appears in the current release, SCOPe 2.08