SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Bacillus subtilis [TaxId: 224308]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2099098Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 2099099Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. 2100042Family c.14.1.0: automated matches [191346] (1 protein)
    not a true family
  6. 2100043Protein automated matches [190246] (52 species)
    not a true protein
  7. 2100072Species Bacillus subtilis [TaxId:224308] [272349] (5 PDB entries)

PDB entries in Species: Bacillus subtilis [TaxId: 224308]:

  1. Domain(s) for 4q1g:
    1. 2100079Domain d4q1ga_: 4q1g A: [272363]
      automated match to d2q34a_
      complexed with edo, gol
    2. 2100080Domain d4q1gb_: 4q1g B: [272364]
      automated match to d2q34a_
      complexed with edo, gol
    3. 2100081Domain d4q1gc_: 4q1g C: [272362]
      automated match to d2q34a_
      complexed with edo, gol
  2. Domain(s) for 4q1h:
    1. 2100076Domain d4q1ha1: 4q1h A:1-247 [272357]
      Other proteins in same PDB: d4q1ha2, d4q1hc2
      automated match to d2q34a_
      complexed with epe, gol, na
    2. 2100077Domain d4q1hb_: 4q1h B: [272355]
      Other proteins in same PDB: d4q1ha2, d4q1hc2
      automated match to d2q34a_
      complexed with epe, gol, na
    3. 2100078Domain d4q1hc1: 4q1h C:1-231 [272350]
      Other proteins in same PDB: d4q1ha2, d4q1hc2
      automated match to d2q34a_
      complexed with epe, gol, na
  3. Domain(s) for 4q1i:
    1. 2100082Domain d4q1ia1: 4q1i A:1-224 [272351]
      Other proteins in same PDB: d4q1ia2, d4q1ic2
      automated match to d2q34a_
      complexed with gol
    2. 2100083Domain d4q1ib_: 4q1i B: [272353]
      Other proteins in same PDB: d4q1ia2, d4q1ic2
      automated match to d2q34a_
      complexed with gol
    3. 2100084Domain d4q1ic1: 4q1i C:1-225 [272358]
      Other proteins in same PDB: d4q1ia2, d4q1ic2
      automated match to d2q34a_
      complexed with gol
  4. Domain(s) for 4q1j:
    1. 2100085Domain d4q1ja_: 4q1j A: [272354]
      automated match to d2q34a_
      complexed with edo, na
    2. 2100086Domain d4q1jb_: 4q1j B: [272356]
      automated match to d2q34a_
      complexed with edo, na
    3. 2100087Domain d4q1jc_: 4q1j C: [272352]
      automated match to d2q34a_
      complexed with edo, na
  5. Domain(s) for 4q1k:
    1. 2100073Domain d4q1ka1: 4q1k A:1-235 [272360]
      Other proteins in same PDB: d4q1ka2
      automated match to d2q34a_
      complexed with gol, po4
    2. 2100074Domain d4q1kb_: 4q1k B: [272359]
      Other proteins in same PDB: d4q1ka2
      automated match to d2q34a_
      complexed with gol, po4
    3. 2100075Domain d4q1kc_: 4q1k C: [272361]
      Other proteins in same PDB: d4q1ka2
      automated match to d2q34a_
      complexed with gol, po4

More info for Species Bacillus subtilis [TaxId:224308] from c.14.1.0 automated matches

Timeline for Species Bacillus subtilis [TaxId:224308] from c.14.1.0 automated matches: