SCOPe 2.08: Domain d4za2d_: 4za2 D:

Lineage for d4za2d_ (4za2 D:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Pectobacterium carotovorum [TaxId:555] [272070] (2 PDB entries)

8. Domain d4za2d_: 4za2 D: [272091]
   automated match to d4avya_
   complexed with nad

Details for d4za2d_

PDB Entry: 4za2, 1.55 Å

PDB Description: crystal structure of pectobacterium carotovorum 2-keto-3-deoxy-d- gluconate dehydrogenase complexed with nad+

PDB Compounds: (D:) 2-deoxy-D-gluconate 3-dehydrogenase

SCOPe Domain Sequences for d4za2d_:

Sequence, based on SEQRES records:

>d4za2d_ c.2.1.0 (D:) automated matches {Pectobacterium carotovorum [TaxId: 555]}
milnsfdlqgkvalitgcdtglgqgmaiglaqagcdivgvnivepkdtiekvtalgrrfl
sltadmsnvsghaelvekavaefghvdilvnnagiirredaiefseknwddvmnlniksv
ffmsqtvarqfikqgkggkiiniasmlsfqggirvpsytasksavmgvtrlmanewakhg
invnaiapgymatnntqqlradeerskeildripagrwglpqdlmgpsvflassasdyin
gytiavdggwlar

Sequence, based on observed residues (ATOM records):

>d4za2d_ c.2.1.0 (D:) automated matches {Pectobacterium carotovorum [TaxId: 555]}
milnsfdlqgkvalitgcdtglgqgmaiglaqagcdivgvnivepkdtiekvtalgrrfl
sltadmsnvsghaelvekavaefghvdilvnnagiirredaiefseknwddvmnlniksv
ffmsqtvarqfikqgkggkiiniasmlsfqggirvpsytasksavmgvtrlmanewakhg
invnaiapgymatnntqerskeildripagrwglpqdlmgpsvflassasdyingytiav
dggwlar

Timeline for d4za2d_:

• d4za2d_ first appeared in SCOPe 2.05
  
• d4za2d_ appears in SCOPe 2.07