SCOPe 2.08: Domain d4ymqa1: 4ymq A:265-508

Lineage for d4ymqa1 (4ymq A:265-508)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.0: automated matches [191623] (1 protein)
   not a true family

6. Protein automated matches [191142] (5 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189274] (121 PDB entries)

8. Domain d4ymqa1: 4ymq A:265-508 [271826]
   Other proteins in same PDB: d4ymqa2
   automated match to d1xdkb_
   complexed with gol, na, zbd

Details for d4ymqa1

PDB Entry: 4ymq, 2 Å

PDB Description: x-ray co-structure of nuclear receptor ror-gammat + src2 peptide with a benzothiadiazole dioxide inverse agonist

PDB Compounds: (A:) Nuclear receptor ROR-gamma

SCOPe Domain Sequences for d4ymqa1:

Sequence; same for both SEQRES and ATOM records:

>d4ymqa1 a.123.1.0 (A:265-508) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aslteiehlvqsvcksyretcqlrledllrqrsnifsreevtgyqrksmwemwercahhl
teaiqyvvefakrlsgfmelcqndqivllkagamevvlvrmcraynadnrtvffegkygg
melfralgcselissifdfshslsalhfsedeialytalvlinahrpglqekrkveqlqy
nlelafhhhlckthrqsilaklppkgklrslcsqhverlqifqhlhpivvqaafpplyke
lfsg

Timeline for d4ymqa1:

• d4ymqa1 first appeared in SCOPe 2.05, called d4ymqa_
  
• d4ymqa1 appears in SCOPe 2.07