SCOPe 2.06: Species: Jc polyomavirus type 3 [TaxId: 804310]

Lineage for Species: Jc polyomavirus type 3 [TaxId: 804310]

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families)
Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
Protein automated matches [191200] (7 species)
not a true protein
Species Jc polyomavirus type 3 [TaxId:804310] [271736] (6 PDB entries)

PDB entries in Species: Jc polyomavirus type 3 [TaxId: 804310]:

Domain(s) for 4x0y:
1. Domain d4x0ya_: 4x0y A: [271741]
  automated match to d4mbzj_
  complexed with edo, gol, k
2. Domain d4x0yb_: 4x0y B: [271742]
  automated match to d4mbzj_
  complexed with edo, gol, k
3. Domain d4x0yc_: 4x0y C: [271746]
  automated match to d4mbzj_
  complexed with edo, gol, k
4. Domain d4x0yd_: 4x0y D: [271747]
  automated match to d4mbzj_
  complexed with edo, gol, k
5. Domain d4x0ye_: 4x0y E: [271752]
  automated match to d4mbzj_
  complexed with edo, gol, k
Domain(s) for 4x0z:
1. Domain d4x0za_: 4x0z A: [271740]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
2. Domain d4x0zb_: 4x0z B: [271738]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
3. Domain d4x0zc_: 4x0z C: [271739]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
4. Domain d4x0zd_: 4x0z D: [271745]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
5. Domain d4x0ze_: 4x0z E: [271743]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
Domain(s) for 4x10:
1. Domain d4x10a_: 4x10 A: [271779]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
2. Domain d4x10b_: 4x10 B: [271777]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
3. Domain d4x10c_: 4x10 C: [271775]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
4. Domain d4x10d_: 4x10 D: [271769]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
5. Domain d4x10e_: 4x10 E: [271776]
  automated match to d4mbzj_
  complexed with bgc, edo, gal, gol, k, nga, sia
Domain(s) for 4x11:
1. Domain d4x11a_: 4x11 A: [272426]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
2. Domain d4x11b_: 4x11 B: [272427]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
3. Domain d4x11c_: 4x11 C: [272425]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
4. Domain d4x11d_: 4x11 D: [272429]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
5. Domain d4x11e_: 4x11 E: [272428]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
Domain(s) for 4x12:
1. Domain d4x12a_: 4x12 A: [271778]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
2. Domain d4x12b_: 4x12 B: [271771]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
3. Domain d4x12c_: 4x12 C: [271780]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
4. Domain d4x12d_: 4x12 D: [271781]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
5. Domain d4x12e_: 4x12 E: [271782]
  automated match to d4mbzj_
  complexed with edo, gol, k, sia
Domain(s) for 4x13:
1. Domain d4x13a_: 4x13 A: [271766]
  automated match to d4mbzj_
  complexed with edo, gol, k
2. Domain d4x13b_: 4x13 B: [271768]
  automated match to d4mbzj_
  complexed with edo, gol, k
3. Domain d4x13c_: 4x13 C: [271763]
  automated match to d4mbzj_
  complexed with edo, gol, k
4. Domain d4x13d_: 4x13 D: [271770]
  automated match to d4mbzj_
  complexed with edo, gol, k
5. Domain d4x13e_: 4x13 E: [271767]
  automated match to d4mbzj_
  complexed with edo, gol, k