Lineage for Species: Jc polyomavirus type 3 [TaxId: 804310]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076457Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 2076458Family b.121.6.1: Papovaviridae-like VP [88649] (3 protein domains)
  6. 2076528Protein automated matches [191200] (7 species)
    not a true protein
  7. 2076606Species Jc polyomavirus type 3 [TaxId:804310] [271736] (6 PDB entries)

PDB entries in Species: Jc polyomavirus type 3 [TaxId: 804310]:

  1. Domain(s) for 4x0y:
    1. 2076607Domain d4x0ya_: 4x0y A: [271741]
      automated match to d4mbzj_
      complexed with edo, gol, k
    2. 2076608Domain d4x0yb_: 4x0y B: [271742]
      automated match to d4mbzj_
      complexed with edo, gol, k
    3. 2076609Domain d4x0yc_: 4x0y C: [271746]
      automated match to d4mbzj_
      complexed with edo, gol, k
    4. 2076610Domain d4x0yd_: 4x0y D: [271747]
      automated match to d4mbzj_
      complexed with edo, gol, k
    5. 2076611Domain d4x0ye_: 4x0y E: [271752]
      automated match to d4mbzj_
      complexed with edo, gol, k
  2. Domain(s) for 4x0z:
    1. 2076612Domain d4x0za_: 4x0z A: [271740]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    2. 2076613Domain d4x0zb_: 4x0z B: [271738]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    3. 2076614Domain d4x0zc_: 4x0z C: [271739]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    4. 2076615Domain d4x0zd_: 4x0z D: [271745]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    5. 2076616Domain d4x0ze_: 4x0z E: [271743]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
  3. Domain(s) for 4x10:
    1. 2076622Domain d4x10a_: 4x10 A: [271779]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    2. 2076623Domain d4x10b_: 4x10 B: [271777]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    3. 2076624Domain d4x10c_: 4x10 C: [271775]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    4. 2076625Domain d4x10d_: 4x10 D: [271769]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    5. 2076626Domain d4x10e_: 4x10 E: [271776]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
  4. Domain(s) for 4x11:
    1. 2076632Domain d4x11a_: 4x11 A: [272426]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    2. 2076633Domain d4x11b_: 4x11 B: [272427]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    3. 2076634Domain d4x11c_: 4x11 C: [272425]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    4. 2076635Domain d4x11d_: 4x11 D: [272429]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    5. 2076636Domain d4x11e_: 4x11 E: [272428]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
  5. Domain(s) for 4x12:
    1. 2076617Domain d4x12a_: 4x12 A: [271778]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    2. 2076618Domain d4x12b_: 4x12 B: [271771]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    3. 2076619Domain d4x12c_: 4x12 C: [271780]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    4. 2076620Domain d4x12d_: 4x12 D: [271781]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    5. 2076621Domain d4x12e_: 4x12 E: [271782]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
  6. Domain(s) for 4x13:
    1. 2076627Domain d4x13a_: 4x13 A: [271766]
      automated match to d4mbzj_
      complexed with edo, gol, k
    2. 2076628Domain d4x13b_: 4x13 B: [271768]
      automated match to d4mbzj_
      complexed with edo, gol, k
    3. 2076629Domain d4x13c_: 4x13 C: [271763]
      automated match to d4mbzj_
      complexed with edo, gol, k
    4. 2076630Domain d4x13d_: 4x13 D: [271770]
      automated match to d4mbzj_
      complexed with edo, gol, k
    5. 2076631Domain d4x13e_: 4x13 E: [271767]
      automated match to d4mbzj_
      complexed with edo, gol, k

More info for Species Jc polyomavirus type 3 [TaxId:804310] from b.121.6.1 automated matches

Timeline for Species Jc polyomavirus type 3 [TaxId:804310] from b.121.6.1 automated matches: