Lineage for d4qpxa_ (4qpx A:)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3017418Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 3017426Protein Viral RNA polymerase [56695] (17 species)
  7. 3017684Species Norwalk virus [TaxId:11983] [103400] (8 PDB entries)
  8. 3017691Domain d4qpxa_: 4qpx A: [271693]
    automated match to d1sh0b_
    protein/RNA complex; complexed with gol, mn

    missing some secondary structures that made up less than one-third of the common domain

Details for d4qpxa_

PDB Entry: 4qpx (more details), 1.86 Å

PDB Description: nv polymerase post-incorporation-like complex
PDB Compounds: (A:) Polyprotein

SCOPe Domain Sequences for d4qpxa_:

Sequence, based on SEQRES records: (download)

>d4qpxa_ e.8.1.4 (A:) Viral RNA polymerase {Norwalk virus [TaxId: 11983]}
skgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvm
rdqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghph
hmrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrl
lwgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydady
srwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvp
ctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklk
eyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnh
edpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqepmfr
wmrfsdlstwegdrnlapsfvn

Sequence, based on observed residues (ATOM records): (download)

>d4qpxa_ e.8.1.4 (A:) Viral RNA polymerase {Norwalk virus [TaxId: 11983]}
skgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvm
rdqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghph
hmrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrl
lwgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydady
srwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvp
ctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklk
eyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnh
edpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelyvprqepmfrwmrfsdl
stwegdrnlapsfvn

SCOPe Domain Coordinates for d4qpxa_:

Click to download the PDB-style file with coordinates for d4qpxa_.
(The format of our PDB-style files is described here.)

Timeline for d4qpxa_: