SCOPe 2.08: Domain d4qdqb2: 4qdq B:434-595

Lineage for d4qdqb2 (4qdq B:434-595)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families)

5. Family b.18.1.0: automated matches [191481] (1 protein)
   not a true family

6. Protein automated matches [190770] (51 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188939] (29 PDB entries)

8. Domain d4qdqb2: 4qdq B:434-595 [271424]
   Other proteins in same PDB: d4qdqa3, d4qdqb3
   automated match to d2qqja2
   complexed with gol, so4

Details for d4qdqb2

PDB Entry: 4qdq, 1.95 Å

PDB Description: physical basis for nrp2 ligand binding

PDB Compounds: (B:) Neuropilin-2

SCOPe Domain Sequences for d4qdqb2:

Sequence, based on SEQRES records:

>d4qdqb2 b.18.1.0 (B:434-595) automated matches {Human (Homo sapiens) [TaxId: 9606]}
csnmlgmlsgliadsqisasstqeylwspsaarlvssrsgwfpripqaqpgeewlqvdlg
tpktvkgviiqgarggdsitavearafvrkfkvsyslngkdweyiqdprtqqpklfegnm
hydtpdirrfdpipaqyvrvyperwspagigmrlevlgcdwt

Sequence, based on observed residues (ATOM records):

>d4qdqb2 b.18.1.0 (B:434-595) automated matches {Human (Homo sapiens) [TaxId: 9606]}
csnmlgmlsgliadsqisasstqeylwspsaarlvssrsgwfpripqaqpgeewlqvdlg
tpktvkgviiqgararafvrkfkvsyslngkdweyiqdprtqqpklfegnmhydtpdirr
fdpipaqyvrvyperwspagigmrlevlgcdwt

Timeline for d4qdqb2:

• d4qdqb2 first appeared in SCOPe 2.05
  
• d4qdqb2 appears in SCOPe 2.07