Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2564270Fold d.72: Cyanase C-terminal domain [55233] (1 superfamily)
    intertwined dimer of alpha-beta(2) motifs ; 2 layers, alpha/beta
  4. 2564271Superfamily d.72.1: Cyanase C-terminal domain [55234] (2 families) (S)
    automatically mapped to Pfam PF02560
  5. 2564357Family d.72.1.0: automated matches [271343] (1 protein)
    not a true family
  6. 2564358Protein automated matches [271344] (3 species)
    not a true protein

Species:

  1. 2564359Pseudomonas lactis [TaxId:1615674] [403795] (1 PDB entry)
  2. 2564370Serratia proteamaculans [TaxId:399741] [271345] (2 PDB entries)
    1. Domains for 4y42:
      1. 2564376Domain d4y42a2: 4y42 A:87-156 [271346]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      2. 2564377Domain d4y42b2: 4y42 B:87-156 [271358]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      3. 2564378Domain d4y42c2: 4y42 C:87-156 [271356]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      4. 2564379Domain d4y42d2: 4y42 D:87-156 [271354]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      5. 2564380Domain d4y42e2: 4y42 E:87-156 [271362]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      6. 2564381Domain d4y42f2: 4y42 F:87-156 [271364]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      7. 2564382Domain d4y42g2: 4y42 G:87-156 [271360]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      8. 2564383Domain d4y42h2: 4y42 H:87-156 [271366]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      9. 2564384Domain d4y42i2: 4y42 I:87-156 [271368]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
      10. 2564385Domain d4y42j2: 4y42 J:87-156 [271370]
        Other proteins in same PDB: d4y42a1, d4y42b1, d4y42c1, d4y42d1, d4y42e1, d4y42f1, d4y42g1, d4y42h1, d4y42i1, d4y42j1
        automated match to d1dwka2
        complexed with gol
    2. Domains for 6b6m:
      1. 2564371Domain d6b6ma2: 6b6m A:87-156 [340375]
        Other proteins in same PDB: d6b6ma1, d6b6mb1, d6b6mc1, d6b6md1, d6b6me1
        automated match to d4y42a2
      2. 2564372Domain d6b6mb2: 6b6m B:87-156 [340411]
        Other proteins in same PDB: d6b6ma1, d6b6mb1, d6b6mc1, d6b6md1, d6b6me1
        automated match to d4y42a2
      3. 2564373Domain d6b6mc2: 6b6m C:87-156 [340394]
        Other proteins in same PDB: d6b6ma1, d6b6mb1, d6b6mc1, d6b6md1, d6b6me1
        automated match to d4y42a2
      4. 2564374Domain d6b6md2: 6b6m D:87-156 [340426]
        Other proteins in same PDB: d6b6ma1, d6b6mb1, d6b6mc1, d6b6md1, d6b6me1
        automated match to d4y42a2
      5. 2564375Domain d6b6me2: 6b6m E:87-156 [340402]
        Other proteins in same PDB: d6b6ma1, d6b6mb1, d6b6mc1, d6b6md1, d6b6me1
        automated match to d4y42a2
  3. 2564386Serratia sp. [TaxId:616] [400572] (1 PDB entry)

More info for Protein automated matches from d.72.1.0: automated matches

Timeline for Protein automated matches from d.72.1.0: automated matches: