Lineage for d4xqoa_ (4xqo A:)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2040266Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2040267Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2040896Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 2040897Protein automated matches [227017] (33 species)
    not a true protein
  7. 2041057Species Influenza a virus [TaxId:1458555] [271092] (2 PDB entries)
  8. 2041061Domain d4xqoa_: 4xqo A: [271100]
    Other proteins in same PDB: d4xqob_, d4xqod_, d4xqof_
    automated match to d1rd8a_
    complexed with gal, nag, sia

Details for d4xqoa_

PDB Entry: 4xqo (more details), 2.85 Å

PDB Description: crystal structure of hemagglutinin from jiangxi-donghu (2013) h10n8 influenza virus in complex with 6'-sln
PDB Compounds: (A:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d4xqoa_:

Sequence, based on SEQRES records: (download)

>d4xqoa_ b.19.1.0 (A:) automated matches {Influenza a virus [TaxId: 1458555]}
dkiclghhavangtivktltneqeevtnatetvestginrlcmkgrkhkdlgnchpigml
igtpacdlhltgmwdtlierenaiaycypgatvnvealrqkimesgginkistgftygss
insagttracmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhpss
tqekndlygtqslsisvgsstyrnnfvpvvgarpqvngqsgridfhwtlvqpgdnitfsh
nggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcpk
yvnrrslmlatgmrnvp

Sequence, based on observed residues (ATOM records): (download)

>d4xqoa_ b.19.1.0 (A:) automated matches {Influenza a virus [TaxId: 1458555]}
dkiclghhavangtivktltneqeevtnatetvestginrlcmkgrkhkdlgnchpigml
igtpacdlhltgmwdtlierenaiaycypgatvnvealrqkimesgginkistgftygss
insagttracmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhpss
tqekndlygtqslsisvgsstyrnnfvpvvgarpqvngqsgridfhwtlvqpgdnitfsh
nggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcpk
yvnrrslmlatmrnvp

SCOPe Domain Coordinates for d4xqoa_:

Click to download the PDB-style file with coordinates for d4xqoa_.
(The format of our PDB-style files is described here.)

Timeline for d4xqoa_: