SCOPe 2.07: Domain d4pa8a1: 4pa8 A:1002-1245

Lineage for d4pa8a1 (4pa8 A:1002-1245)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.4: Tryptophan biosynthesis enzymes [51381] (4 proteins)

6. Protein automated matches [190053] (10 species)
   not a true protein

7. Species Sulfolobus solfataricus [TaxId:2287] [190005] (9 PDB entries)

8. Domain d4pa8a1: 4pa8 A:1002-1245 [270991]
   Other proteins in same PDB: d4pa8a2
   automated match to d3tc7a_
   complexed with 2k6, gol, so4

Details for d4pa8a1

PDB Entry: 4pa8, 1.2 Å

PDB Description: crystal structure of a de novo retro-aldolase catalyzing asymmetric michael additions, with a covalently bound product analog

PDB Compounds: (A:) Retro-Aldolase

SCOPe Domain Sequences for d4pa8a1:

Sequence, based on SEQRES records:

>d4pa8a1 c.1.2.4 (A:1002-1245) automated matches {Sulfolobus solfataricus [TaxId: 2287]}
prylkgwledvvqlslrrpsvhasrqrpiislnerilefnkrnitaiiayylrkspsgld
verdpieyakymeryavglsikteekyfngsyemlrkiassvsipilmndfivkesqidd
aynlgadtvllivniltereleslleyarsygmeplilindendldialrigarfivifs
mnfetgeinkenqrklismipsnvvkvahldiserneieelrklgvnaflissslmrnpe
kike

Sequence, based on observed residues (ATOM records):

>d4pa8a1 c.1.2.4 (A:1002-1245) automated matches {Sulfolobus solfataricus [TaxId: 2287]}
prylkgwledvvqlslrrpsvhasrqrpiislnerilefnkrnitaiiayylrkrdpiey
akymeryavglsikteekyfngsyemlrkiassvsipilmndfivkesqiddaynlgadt
vllivniltereleslleyarsygmeplilindendldialrigarfivifsmnfgeink
enqrklismipsnvvkvahldiserneieelrklgvnaflissslmrnpekike

Timeline for d4pa8a1:

• d4pa8a1 first appeared in SCOPe 2.05, called d4pa8a_
  
• d4pa8a1 appears in SCOPe 2.06
  
• d4pa8a1 appears in the current release, SCOPe 2.08