SCOPe 2.08: Domain d4yqyb1: 4yqy B:2-248

Lineage for d4yqyb1 (4yqy B:2-248)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Sulfitobacter sp. [TaxId:314267] [270925] (1 PDB entry)

8. Domain d4yqyb1: 4yqy B:2-248 [270926]
   Other proteins in same PDB: d4yqya2, d4yqyb2
   automated match to d4bnwc_
   complexed with mg

Details for d4yqyb1

PDB Entry: 4yqy, 1.38 Å

PDB Description: crystal structure of a putative dehydrogenase from sulfitobacter sp. (cog1028) (target efi-513936) in its apo form

PDB Compounds: (B:) Putative Dehydrogenase

SCOPe Domain Sequences for d4yqyb1:

Sequence, based on SEQRES records:

>d4yqyb1 c.2.1.0 (B:2-248) automated matches {Sulfitobacter sp. [TaxId: 314267]}
dlkgktaivtggrgdigracvlelaarganvainymassegadsavaeikaaggnafalq
gdmtkeadvaalvektvkefgqvdtlvhvtggliarvtmsemtldhwqsvmdvnltsfvl
mvreclphmtegssivglasqagrdgggpgasaygaskgalmtltrglakelgpkirvns
lcpgmidtdfhniftkpevrthvanvspvkregtsedvaklavflasddaafitganvdi
nggmlfs

Sequence, based on observed residues (ATOM records):

>d4yqyb1 c.2.1.0 (B:2-248) automated matches {Sulfitobacter sp. [TaxId: 314267]}
dlkgktaivtggrgdigracvlelaarganvainymassegadsavaeikaaggnafalq
gdmtkeadvaalvektvkefgqvdtlvhvtggliarvtmsemtldhwqsvmdvnltsfvl
mvreclphmtegssivglasqagrdgggpgasaygaskgalmtltrglakelgpkirvns
lcpgmidtanvspvkregtsedvaklavflasddaafitganvdinggmlfs

Timeline for d4yqyb1:

• d4yqyb1 first appeared in SCOPe 2.05, called d4yqyb_
  
• d4yqyb1 appears in SCOPe 2.07