SCOPe 2.08: Domain d4yqzb1: 4yqz B:2-234

Lineage for d4yqzb1 (4yqz B:2-234)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Thermus thermophilus [TaxId:262724] [270920] (3 PDB entries)

8. Domain d4yqzb1: 4yqz B:2-234 [270922]
   Other proteins in same PDB: d4yqza2, d4yqzb2, d4yqzc2, d4yqzd2
   automated match to d4bo8c_
   complexed with cl

Details for d4yqzb1

PDB Entry: 4yqz, 1.81 Å

PDB Description: crystal structure of a putative oxidoreductase from thermus thermophilus hb27 (tt_p0034, target efi-513932) in its apo form

PDB Compounds: (B:) Putative oxidoreductase

SCOPe Domain Sequences for d4yqzb1:

Sequence, based on SEQRES records:

>d4yqzb1 c.2.1.0 (B:2-234) automated matches {Thermus thermophilus [TaxId: 262724]}
klkgkkalviaagqgigraiaeafqregaevlgatlhpeklqgvvpavrldardkeavfr
liqgldrldvlvnaqgvvpvgglleatdqdweeafllnaksvfwamqaalpkmaaqgggs
viniasvaafktvpgrfiysatkaalvamtkaaalefapkgvrvnaicpgtvdtpslrer
aggeeglrafaerqllkrlgrpeeiaalavylasdegafatgsafvvdggmsl

Sequence, based on observed residues (ATOM records):

>d4yqzb1 c.2.1.0 (B:2-234) automated matches {Thermus thermophilus [TaxId: 262724]}
klkgkkalviaagqgigraiaeafqregaevlgatlhpeklqgvvpavrldardkeavfr
liqgldrldvlvnaqgvvpvgglleatdqdweeafllnaksvfwamqaalpkmaaqgggs
viniasvaafktvpgrfiysatkaalvamtkaaalefapkgvrvnaicpgtvdtpslrer
aeglrafaerqllkrlgrpeeiaalavylasdegafatgsafvvdggmsl

Timeline for d4yqzb1:

• d4yqzb1 first appeared in SCOPe 2.05, called d4yqzb_
  
• d4yqzb1 appears in SCOPe 2.07