Lineage for Species: Jc polyomavirus [TaxId: 10632]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076457Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 2076458Family b.121.6.1: Papovaviridae-like VP [88649] (3 protein domains)
  6. 2076528Protein automated matches [191200] (7 species)
    not a true protein
  7. 2076637Species Jc polyomavirus [TaxId:10632] [270722] (7 PDB entries)

PDB entries in Species: Jc polyomavirus [TaxId: 10632]:

  1. Domain(s) for 4wdy:
    1. 2076653Domain d4wdya_: 4wdy A: [270730]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    2. 2076654Domain d4wdyb_: 4wdy B: [270729]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    3. 2076655Domain d4wdyc_: 4wdy C: [270726]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    4. 2076656Domain d4wdyd_: 4wdy D: [270727]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    5. 2076657Domain d4wdye_: 4wdy E: [270732]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
  2. Domain(s) for 4wdz:
    1. 2076648Domain d4wdza_: 4wdz A: [270725]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    2. 2076649Domain d4wdzb_: 4wdz B: [270724]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    3. 2076650Domain d4wdzc_: 4wdz C: [270723]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    4. 2076651Domain d4wdzd_: 4wdz D: [270731]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    5. 2076652Domain d4wdze_: 4wdz E: [270728]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
  3. Domain(s) for 4we0:
    1. 2076658Domain d4we0a_: 4we0 A: [270734]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    2. 2076659Domain d4we0b_: 4we0 B: [270733]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    3. 2076660Domain d4we0c_: 4we0 C: [270736]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    4. 2076661Domain d4we0d_: 4we0 D: [270735]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
    5. 2076662Domain d4we0e_: 4we0 E: [270738]
      automated match to d4mbzj_
      complexed with edo, gol; mutant
  4. Domain(s) for 4x14:
    1. 2076668Domain d4x14a_: 4x14 A: [271757]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    2. 2076669Domain d4x14b_: 4x14 B: [271756]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    3. 2076670Domain d4x14c_: 4x14 C: [271761]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    4. 2076671Domain d4x14d_: 4x14 D: [271759]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    5. 2076672Domain d4x14e_: 4x14 E: [271765]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
  5. Domain(s) for 4x15:
    1. 2076663Domain d4x15a_: 4x15 A: [271762]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    2. 2076664Domain d4x15b_: 4x15 B: [271764]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    3. 2076665Domain d4x15c_: 4x15 C: [271772]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    4. 2076666Domain d4x15d_: 4x15 D: [271773]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
    5. 2076667Domain d4x15e_: 4x15 E: [271774]
      automated match to d4mbzj_
      complexed with bgc, edo, gal, gol, k, nga, sia
  6. Domain(s) for 4x16:
    1. 2076643Domain d4x16a_: 4x16 A: [271744]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    2. 2076644Domain d4x16b_: 4x16 B: [271751]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    3. 2076645Domain d4x16c_: 4x16 C: [271748]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    4. 2076646Domain d4x16d_: 4x16 D: [271750]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    5. 2076647Domain d4x16e_: 4x16 E: [271754]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
  7. Domain(s) for 4x17:
    1. 2076638Domain d4x17a_: 4x17 A: [271753]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    2. 2076639Domain d4x17b_: 4x17 B: [271749]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    3. 2076640Domain d4x17c_: 4x17 C: [271755]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    4. 2076641Domain d4x17d_: 4x17 D: [271758]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia
    5. 2076642Domain d4x17e_: 4x17 E: [271760]
      automated match to d4mbzj_
      complexed with edo, gol, k, sia

More info for Species Jc polyomavirus [TaxId:10632] from b.121.6.1 automated matches

Timeline for Species Jc polyomavirus [TaxId:10632] from b.121.6.1 automated matches: