Lineage for d4w88b1 (4w88 B:92-430)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2083716Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 2083717Protein automated matches [190075] (86 species)
    not a true protein
  7. 2084298Species Uncultured bacterium [TaxId:77133] [188624] (9 PDB entries)
  8. 2084303Domain d4w88b1: 4w88 B:92-430 [269969]
    Other proteins in same PDB: d4w88b2
    automated match to d4im4a_
    complexed with bgc, gal, mg, trs, xys

Details for d4w88b1

PDB Entry: 4w88 (more details), 1.58 Å

PDB Description: crystal structure of xeg5a, a gh5 xyloglucan-specific endo-beta-1,4- glucanase from ruminal metagenomic library, in complex with a xyloglucan oligosaccharide and tris
PDB Compounds: (B:) Xyloglucan-specific endo-beta-1,4-glucanase

SCOPe Domain Sequences for d4w88b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4w88b1 c.1.8.0 (B:92-430) automated matches {Uncultured bacterium [TaxId: 77133]}

SCOPe Domain Coordinates for d4w88b1:

Click to download the PDB-style file with coordinates for d4w88b1.
(The format of our PDB-style files is described here.)

Timeline for d4w88b1:

  • d4w88b1 first appeared in SCOPe 2.05, called d4w88b_

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