SCOPe 2.06: Domain d4ml8d2: 4ml8 D:235-514

Lineage for d4ml8d2 (4ml8 D:235-514)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.32: FAD-linked oxidases, C-terminal domain [55103] (7 families)
   duplication: contains two subdomains of this fold

5. Family d.58.32.0: automated matches [227166] (1 protein)
   not a true family

6. Protein automated matches [226875] (3 species)
   not a true protein

7. Species Maize (Zea mays) [TaxId:4577] [269671] (7 PDB entries)

8. Domain d4ml8d2: 4ml8 D:235-514 [269674]
   Other proteins in same PDB: d4ml8a1, d4ml8b1, d4ml8c1, d4ml8d1
   automated match to d2qpma2
   complexed with fad, peg

Details for d4ml8d2

PDB Entry: 4ml8, 2.7 Å

PDB Description: structure of maize cytokinin oxidase/dehydrogenase 2 (zmcko2)

PDB Compounds: (D:) Cytokinin oxidase 2

SCOPe Domain Sequences for d4ml8d2:

Sequence, based on SEQRES records:

>d4ml8d2 d.58.32.0 (D:235-514) automated matches {Maize (Zea mays) [TaxId: 4577]}
pemvrwirvlysdfesftedqemlimaensfdyiegfviinrtgilnnwrasfkpqdpvq
ashfqsdgrvlycleltknfnsgdtdtmeqevavllsrlrfiqstlfhtdvtylefldrv
htselklraqslwevphpwlnlliprssirrfatevfgrilkdsnngpillypvnkskwd
nktsvvipdeeifylvgflssapslsghgsiahamslnsqivefceeadigmkqylahyt
tqeqwkthfgarwetferrkhrydplailapgqrifpkas

Sequence, based on observed residues (ATOM records):

>d4ml8d2 d.58.32.0 (D:235-514) automated matches {Maize (Zea mays) [TaxId: 4577]}
pemvrwirvlysdfesftedqemlimaensfdyiegfviinrtgilnnwrasfkpqdpvq
grvlycleltknfnsgdtdtmeqevavllsrlrfiqstlfhtdvtylefldrvhtselkl
raqslwevphpwlnlliprssirrfatevfgrilkdsnngpillypvnkskwdnktsvvi
pdeeifylvgflssapslsghgsiahamslnsqivefceeadigmkqylahyttqeqwkt
hfgarwetferrkhrydplailapgqrifpkas

Timeline for d4ml8d2:

• d4ml8d2 first appeared in SCOPe 2.05
  
• d4ml8d2 appears in SCOPe 2.07
  
• d4ml8d2 appears in the current release, SCOPe 2.08